KEGG   Sphingobium baderi: ATN00_14110
Entry
ATN00_14110       CDS       T04194                                 
Name
(GenBank) pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
sbd  Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:sbd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sbd03009]
    ATN00_14110
Enzymes [BR:sbd01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     ATN00_14110
Ribosome biogenesis [BR:sbd03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    ATN00_14110
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF6494
Other DBs
NCBI-ProteinID: ALR21254
UniProt: A0A0S3F0R5
Position
2894549..2895481
AA seq 310 aa
MEPPKKSGPRRPARPGAPGKPGVGKPVDSRARSGSRPPRPAPGKAGKPASHPANPHPARA
AANAGGKTEPQRIAKLLARAGVASRREIERMIVEGRIALNGEVVLTPATLLASLHGVTVD
SIPVNQPAPARLFLFHKPSGFLTTEHDPKGRPIIYDKLPADLPRVMPIGRLDMTTEGLLL
LTTDGEFKRQMELPSTGVPRTYRARAFGEVSQNQLEDLFDGIEIDGIRYGRIEANLERRT
GRNQWIEMTLTEGKNREVRRVLEHLGLQVSRLIRTSYGPFHLGELASGAVEEVRQHDLIL
FRKSLKGTKG
NT seq 933 nt   +upstreamnt  +downstreamnt
gtggaaccgccaaaaaaatcaggaccgcgccgccctgctcgccctggcgcccctggaaag
cccggtgttggaaaacccgttgacagccgtgcacgcagtggctcgcgcccaccccgtccc
gctcccggcaaagccgggaagcccgcatcgcatccagccaatccgcatccggcgcgcgct
gccgccaatgccggcggcaagacggaaccacagcggatcgcgaagcttctcgcccgcgcc
ggtgtcgcatcccgccgcgaaatcgagcggatgattgtcgaaggccgcatcgccctgaat
ggtgaggttgtcctgacgcccgccaccctgctcgcttctttgcatggcgtgacggtcgat
agcatcccggtgaaccagcccgcccccgcccgcctgttcctgttccataagccatcaggt
ttcctgacgaccgagcacgaccccaagggccggccaatcatttatgacaaactgcccgcc
gacctgccccgcgtcatgccgatcggacggctcgacatgaccaccgagggcctgctgctt
ctcaccaccgatggcgaattcaagcgtcagatggagttgccctccaccggcgtgcctcgg
acttatcgcgcgcgcgccttcggtgaagtcagccagaaccagctcgaagacctgttcgat
ggcattgagatcgacggcatccgctatggccggatcgaggccaatctggagcggcgcacc
ggacgcaaccaatggatcgaaatgaccctgacggaaggcaaaaatcgggaagtccgccgc
gtgctggaacatctgggacttcaggtgagccgtctgatccgtaccagctatggtcctttc
catttgggcgagttggcctccggcgcggttgaggaagtgcggcagcatgacctcatcctc
tttcgcaagagtctgaaaggaacgaaggggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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