KEGG   Sphingobium baderi: ATN00_21495
Entry
ATN00_21495       CDS       T04194                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
sbd  Sphingobium baderi
Pathway
sbd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ATN00_21495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbd03400]
    ATN00_21495
DNA repair and recombination proteins [BR:sbd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ATN00_21495
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ATN00_21495
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 nSTAND1 AAA_16 DnaJ_CXXCXGXG AAA_29 RsgA_GTPase AAA_15
Other DBs
NCBI-ProteinID: ALR23114
UniProt: A0A0S3F5Y8
Position
pDE2:44260..46845
AA seq 861 aa
MRGARQNNLKNVDVDVPRDAFVVFTGISGSGKSSLAFGTLYAEAQRRYLESVAPYARRLI
DQAGVPEVDAIDGLPPAVALQQQRGSANARSSVGSVTTLSSLVRMLYSRVGEYPRNQPML
YAEDFSPNTVAGACPTCHGIGRVYDATEETMVPDDSLTIRDRAIAAWPPAWHGQNLRDIL
VSLGYDVDTPWRDLPKKDRDWILFTDETPTVPVYAGLTPEQTRVALKRRMEPSYQGTFTG
ARRYVLETFANTKSALMKKRVSQYIIGRDCPTCDGKRLKREALSVKFAGLDIAEFGDLTV
LKLRDLLTPVAHGEYGSASTTLKGHVLGKAARDAAVERRVAAGGSAHKAAPDVRRTPNLS
DEKRVAAQRLASELLERLGPLIDLGLGYISLDRSTPTLSSGELQRLRLATQLSSQLFGVV
YVLDEPSAGLHPADGEALLTILERLKAAGNSLFVVEHDLDVIRHAEWLVDVGPGAGEKGG
EVLYSGPIAGLAGVEASITRRYLFAEPDAHDRTPREAKAWLRLEGVTRNNLHGLDVALPI
GCFTAVTGVSGSGKSSLVSQALPELVTEQLGGTPAAEEEDTDPLLDVAREETEGRIVAGM
EHVRRLVRVDQKPIGRTPRSNLSTYSGLFDHVRKIFANTPLARRRHYSPGRFSFNVAQGR
CPVCEGEGFVMVELLFLPSVYAPCSTCHGSRYNPQTLEVEWNGRNIAQVLELTVDEACDF
FASEPSVMRSLDVLREIGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGNTIYILDEP
TSGLHPSDADRLMRHLQGLVDVGNTVVVVEHDMRAISQVDWVIDLGPGAGEDGGRIIASG
VPHDVAEAQGSLTAPYLKAAL
NT seq 2586 nt   +upstreamnt  +downstreamnt
gtgcgcggcgcgcggcagaacaacctcaagaatgttgatgtggacgttccgcgcgatgcc
ttcgtggtgttcaccggcatatcgggatcgggcaagtcgagcctcgccttcggcaccctc
tatgccgaggcacagcgccgctatctggaatcggtcgcgccctacgcccgccgcctgatc
gatcaggccggcgtgccggaggttgacgccatcgacgggttgccgcccgcggtcgcgttg
cagcagcagcgcggctcggccaatgcgcggtcttcggttggcagcgtgacgacgctctcc
agcctggtgcggatgctctattcgcgcgtcggagaatatccgcgcaatcagccgatgctc
tatgcggaggacttctcccccaacaccgtggccggggcctgcccgacctgccacggcatc
gggcgcgtctatgacgcgaccgaagagacgatggtgcccgacgacagtctcaccattcgc
gatcgggcgatcgcggcatggccgccggcgtggcacggccagaacctgcgcgatatcctt
gtgtcgctcggctatgatgtcgacacgccatggcgcgatcttccgaagaaggatcgtgac
tggatactcttcaccgacgagacgccgacggtgccggtctatgcgggtctgacgcccgaa
cagacgcgcgttgccctcaagcgtcgtatggagccgagctatcagggcaccttcaccggc
gcccgtcgctacgtgctggagaccttcgccaacaccaaaagcgcgctgatgaagaagcgt
gtctcgcaatatatcatcggccgcgattgcccgacctgcgacggcaagcgcctgaagcgc
gaggccctgtcggtgaagtttgccggcctggacatcgccgagtttggcgacctgacggtg
ctgaagctccgggacttgctcacgcccgtcgcccatggcgagtatggtagcgcctcgacg
accctgaagggccatgttctcggcaaggcggcccgcgatgcggcggttgaacgtagggtc
gcggcgggaggctcggcacacaaggcagcgcctgacgtgcgccgcacgcccaatctttcc
gatgagaagcgggtcgccgcgcagcgtctcgcatccgagctgctcgaacggctaggcccg
ctgatcgaccttggccttggctacatctcgctcgaccgcagcacgccgacgctttcctcc
ggcgagctgcaacgcctgcgccttgccactcaattgtcgtcacagcttttcggcgtggtc
tatgtgctggacgagccatcggcggggctgcacccggcagacggcgaagcgttgctgacc
atccttgagcggctgaaggcggcgggcaactcgctgttcgttgtcgagcatgatcttgac
gtgatccgccatgccgaatggctggtcgatgtggggccaggtgccggcgaaaagggcggc
gaagtgctctacagcggcccgatcgcagggcttgccggcgtcgaggcgtcgatcacccgt
cgctatctgttcgcagaacctgacgcccatgaccggaccccgcgcgaagcaaaagcatgg
ctccgtcttgaaggtgtgacccgcaacaatcttcacgggctcgacgtcgcgctaccgatt
ggctgcttcaccgccgtcaccggggtttcaggatcgggcaagtccagtcttgtcagccag
gcacttccggagcttgtgacggaacaactcggcggcacgccggctgccgaggaggaggat
accgatccgctgctcgatgttgcgcgggaagagaccgaaggccgcatcgttgcgggcatg
gagcatgtgcgcaggctggtgcgggtcgatcagaagccgatcggccgcactccacgctcg
aacctctccacctacagcggcctgttcgatcatgtgcgcaagatcttcgcgaacacccca
ctggcgcgccggcgccactacagcccgggcaggttctccttcaacgtcgcacagggccgc
tgcccggtgtgcgagggtgagggcttcgtcatggtggagctgttgttcctgcccagcgtc
tatgcgccctgctcgacctgccatggcagccgctacaatccgcagacgctcgaagtcgaa
tggaacggccgcaacatcgcccaggtgcttgagctgacggtggacgaggcgtgcgacttc
ttcgcgagcgaaccgtccgtcatgcgctcgctcgatgtgctgcgggagattggcctcggc
tatctgaggcttggacagccggcgacggaactgtcgggcggcgaggcccagcgcatcaag
ctcgcgaccgagctgcaacgcgcccagcgtggcaacaccatctacatcctcgacgagccg
acttcggggcttcacccttccgacgctgatcggctgatgcggcacctgcagggccttgtc
gatgtcggcaatacggtcgtcgtcgtcgagcatgacatgcgagctatttcacaggtggat
tgggtgatcgatctggggcctggcgctggcgaagatggtggccggatcatcgcgagcggc
gtccctcacgatgttgccgaagcgcaaggcagcctgaccgcgccttatctaaaggcggcg
ctttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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