KEGG   Sorghum bicolor (sorghum): 110430976
Entry
110430976         CDS       T01086                                 
Name
(RefSeq) cleavage stimulation factor subunit 50
  KO
K14406  cleavage stimulation factor subunit 1
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110430976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    110430976
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     110430976
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Cytochrom_D1 Ge1_WD40 RMC1_N
Other DBs
NCBI-GeneID: 110430976
NCBI-ProteinID: XP_021304987
Position
1:complement(6641333..6645434)
AA seq 423 aa
MNEAVQEAKLLRQVNALIVAHLRSQNLGQAAAAVAAATMTPISAAESVPANQLLRLVAKG
LAAEGGGGAASAFDSAGFGGAVQPLGSSAVDFSMQDVKGSSKSFPKHEAKHVSDHKNAAR
CAKFSPDGKYFATGSADTSIKFFEVAKIKQTMVGDSKDGPARPVIRTFYDHTQAINDLDF
HPESPILISAAKDNTIKFFDFSKTNARKAFRVIQDTHNVRSVCFHPCGDYLLAGTDHPVA
HLYDINTFTCYLSANAQDSSSPINQVRYSCTGSLYVTASKDGSLRIWDGVSAECVRPIIG
AHGSAEATSAIFTRDERYVLSCGKDSCVKLWEVGTGRLVKQYAGAIRRQFRCQAVFNETE
EFVLSVDEQNNEVVVWDALTAEKVARLPSGSTGAPRWLDHSPVEPVFVICGNDRSIRFWK
QTV
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaacgaggcggtgcaggaggcgaagctgctgcggcaggtgaacgcgctcatcgtggcg
cacctccgtagccagaacctcgggcaggccgcagccgccgtcgccgccgccaccatgacc
cccatctccgccgccgaatccgtccccgcaaatcaactcctacgtctcgtggccaagggc
ctcgcggcggagggcggaggaggagccgcttccgcattcgactccgccgggttcggtggg
gcggtgcagccgctcggctccagtgccgtggatttcagtatgcaggatgtcaagggctca
tccaagagcttccccaagcacgaggcgaagcatgtctctgaccataagaacgctgcccgg
tgtgcgaaatttagtcctgatgggaagtattttgcaactgggagtgctgatacatccatt
aagttttttgaggttgctaaaattaagcagactatggtaggggactccaaagatggtcct
gccaggcctgtgattcgcacattttatgatcacacacaggccatcaatgatctggatttt
catcctgagagtccaatactgatatcagctgcaaaagacaatacaataaaattttttgac
ttctcaaagaccaatgcgaggaaagcgttcagagttattcaggatactcataatgttaga
tctgtatgttttcatccttgtggggattaccttttagcagggactgatcacccagttgct
catttatatgatataaatacttttacatgctacttatcagcaaatgcacaggattctagt
tctcccattaaccaggtacgctactcctgtactgggagcttgtatgtgactgcttctaaa
gatggttctctgcgcatttgggatggagtatctgctgaatgtgttcgacctattattgga
gcacatggatctgcagaagctactagcgcaattttcaccagagatgagaggtatgtccta
tcttgtgggaaagattcttgtgtcaagttatgggaagttggcactggacgacttgtgaag
caatatgcaggagccattcgcagacaatttcgttgtcaggctgtcttcaatgaaaccgaa
gaatttgttctatcagttgatgaacaaaacaatgaggttgtcgtctgggatgcacttact
gcagaaaaggttgcaagattgccctctggcagcactggtgctcccagatggctcgaccac
tccccagttgaaccagtttttgttatttgtggaaatgatagatcgatcagattctggaaa
caaaccgtatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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