KEGG   Sorghum bicolor (sorghum): 110431789
Entry
110431789         CDS       T01086                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110431789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbi04121]
    110431789
Enzymes [BR:sbi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110431789
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    110431789
SSDB
Motif
Pfam: Sina_RING Sina_ZnF zf-RING_UBOX zf-RING_5 Trm112p
Other DBs
NCBI-GeneID: 110431789
NCBI-ProteinID: XP_021307045
Position
1:complement(12419855..12423519)
AA seq 280 aa
MEPKAMMEGVRMAMGALDCPICNEPLVPPIYQCGMGHLICKSCRNRMTKCPSPLCSTTDF
MRCFGMERIAGAIEVPCCFAKNGCTEKMAYFNMSKHEKACQRGPCFCPEPGCGFTAPSLA
IWGHFTRRHKWPCTVFRYYVEFCLLLQLGPHVLHAQDGSSVFLVNVVPAPAEPPVLGHAI
SLVCVQPETSTGSKRSRFGLSLMFSCFTGHHQLLTLEDVRSSSLADGLPKDVVCFVPKAS
GDDSAAILRITIDTELAYDDEKLEDDEDSEDESYEEEDDE
NT seq 843 nt   +upstreamnt  +downstreamnt
atggagccgaaagctatgatggagggagtacgaatggcgatgggcgccttggactgcccc
atctgcaacgagcccctcgtgcctccgatctaccagtgtggcatggggcacttgatctgc
aaatcatgccgtaatcgcatgaccaaatgcccctctcccctatgcagcacaactgacttc
atgcgctgctttggcatggagcgcatcgccggagccatcgaggttccctgttgctttgcc
aagaacggatgcaccgagaagatggcctacttcaacatgtcaaagcacgagaaggcgtgt
cagcgcgggccatgcttctgcccagagcccggctgcggcttcaccgcgccatctttggcg
atttggggccatttcacccgccgccacaagtggccgtgcacagtgttcagatactatgtg
gagttctgcttgctcctccagctgggtccgcacgtgctccatgcccaggacggcagcagc
gtcttcctcgtgaacgtggtgccagcgccagcggaaccccctgtccttgggcacgccatc
tccctcgtctgcgtccagccggagaccagcacaggctccaagaggtccaggttcggtttg
tctttgatgttctcgtgcttcacgggccaccaccagctcttgacgctggaagacgtgagg
agctcgtcgctggctgatgggctgccaaaggacgtcgtctgcttcgtgcccaaggcatct
ggagacgacagtgccgccatactcagaatcaccatagatacggaactggcatacgatgat
gagaagctagaggacgacgaggatagcgaagacgagagctacgaggaagaagatgacgaa
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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