KEGG   Sorghum bicolor (sorghum): 8054332
Entry
8054332           CDS       T01086                                 
Name
(RefSeq) long chain base biosynthesis protein 1a
  KO
K00654  serine palmitoyltransferase [EC:2.3.1.50]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi00600  Sphingolipid metabolism
sbi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09100 Metabolism
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    8054332
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sbi01007]
    8054332
Enzymes [BR:sbi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.50  serine C-palmitoyltransferase
     8054332
Amino acid related enzymes [BR:sbi01007]
 Aminotransferase (transaminase)
  Class II
   8054332
SSDB
Motif
Pfam: Aminotran_1_2 Cys_Met_Meta_PP OKR_DC_1
Other DBs
NCBI-GeneID: 8054332
NCBI-ProteinID: XP_002465548
UniProt: A0A921S7I8 C5WQW4
Position
1:71347452..71352239
AA seq 485 aa
MDMALPVVNATAAVLARVSAAFNAPLARAVVFGVHIDGHLVVEGLLIAVIVFQLSRKSYK
PPKKPLTEKEIDELCDEWEPEPLCPPIKEGARIDTPMLESAAGPHTIVDGKEVVNFASAN
YLGLIGNEKIIDSCIGSLEKYGVGSCGPRGFYGTIDVHLDCESKIANFLGTPDSILYSYG
ISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLHLSRSTVVYFKHNDMASLASTLEKLTHG
NKRAEKIRRYIVVESIYQNSGQIAPLDEIVRLKEKYRFRVILEESHSFGVLGKSGRGLAE
HYGVPIEKIDIITAGMGNALATDGGFCTGSVRVVDHQRLSSSGYVFSASLPPYLASAAVS
AVNYLEENPSVLANLRSNIALLHKELSDTPGLEISSHVLSPIVFLKLKKSTGSPTTDLDL
LETIADKVLKEDSVFIVTSKKSNLDRCKLPLGIRLFVSAGHTESDISRLSSSLKRVSASV
LSDYF
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggacatggcattgcccgttgtgaatgccacagcggcagtgctcgcccgtgtctcggct
gcattcaatgccccccttgcccgtgcagtcgtctttggggtccatattgatgggcacttg
gtcgtagaaggactgcttattgcagtcatagtgtttcagctctccaggaagagctacaaa
ccaccaaagaaaccactcactgaaaaggagattgatgagctatgtgatgagtgggagcca
gagccgctatgccctccaatcaaggagggggccagaatagatactccaatgttggaaagt
gccgctggaccacatacgattgttgatggtaaagaagttgtgaactttgcatcagcaaac
taccttggtttaattggcaacgaaaagattattgattcttgcattggttcactggagaaa
tatggtgttgggtcttgtggtccacgtggcttctatggaacaattgatgtccatcttgac
tgtgagtcaaaaatagctaatttcctggggactccagactccattctgtattcatatggg
atttctacaatattcagtgtgatacctgccttctgtaagaaaggagatatcatagtcgct
gatgagggtgttcactgggcagtgcaaaatggtctccatctatcaagaagcactgtggtg
tacttcaagcacaatgatatggcttcacttgcaagcactttggaaaaacttactcatgga
aataaacgtgctgaaaagattagacgctacattgttgtagaatccatttaccagaattct
ggccaaattgcccccttggatgagattgtcaggttgaaggagaaatatcgtttccgtgtt
attctggaggagagccattcttttggggtgcttggcaagtctgggcgtggccttgctgaa
cattatggagttcctattgaaaaaattgatatcatcactgctggaatgggaaatgcatta
gctactgatggtggtttttgtacaggaagtgtcagagttgttgatcatcagcgtctaagc
agctctgggtatgttttctctgcatctctgccaccttatcttgccagcgctgctgtttct
gctgtcaactacctggaggagaatccctcagttcttgcaaacctaaggagcaatattgct
cttttgcataaagaactatcagatactccagggcttgaaatttccagccatgttctgtca
cctatcgtcttccttaagctgaagaaatcaactggctctcctaccactgatctagatctt
cttgaaactattgctgacaaggtcttgaaggaagattcagttttcattgtgacatcaaag
aagtcaaatctggataggtgcaaacttccccttggaatccgcctgtttgtatcagctgga
catactgaatcagacatctccaggctttcctcatccttgaagagggtttctgcatcagtt
ctttcagactacttttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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