KEGG   Sorghum bicolor (sorghum): 8056889
Entry
8056889           CDS       T01086                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
  KO
K07466  replication factor A1
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03030  DNA replication
sbi03420  Nucleotide excision repair
sbi03430  Mismatch repair
sbi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    8056889
   03420 Nucleotide excision repair
    8056889
   03430 Mismatch repair
    8056889
   03440 Homologous recombination
    8056889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sbi03000]
    8056889
   03032 DNA replication proteins [BR:sbi03032]
    8056889
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8056889
Transcription factors [BR:sbi03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    8056889
DNA replication proteins [BR:sbi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    8056889
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     8056889
   MMR (mismatch excision repair)
     8056889
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     8056889
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon DUF223
Other DBs
NCBI-GeneID: 8056889
NCBI-ProteinID: XP_002468278
UniProt: C5WST0
Position
1:complement(73275150..73278963)
AA seq 623 aa
MDAANSVTPGAVSHILAHPSTGSDGAVPDLVVQVLDLKSIGTGSRFSFMATDGKDKIKAM
FPTSFASEVRSGNLKNLGLIRILDYTCNAVNGNNGKVLIVIKCELVCQALDAEINGEAKK
EEPPIVLKPKDEGVVVAEQANAPPVAIKPKQELKSASQIVNEQRGNAAPAARLSMTRRVH
PLITLNPYQGNWVIKVRVTSKGNLRTYRNARGEGCVFNVELTDEDGTQIQATMFNEAAKK
FYPIFELGKVYYVSKGSLRIANKQFKTVQNDYEMSLNENAIVEEAEGETFIPQVQYNFVK
IDHLGTYVGGRELVDIIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVSISLWND
LATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLAINPDLPEAQNVKSWYDS
EGKDTSLAPIGAEMGAARAGGLKSMYSDRVFLSHITSDPAMGQEKPVFFSLNAIISHIKP
DQNMWYRACKTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVLKISDPTGEAWVSVFNE
HAEKIIGCSADELDRIRKEEGDDSYILKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRS
EAPVDYAAESKYLLEEIAKLTAC
NT seq 1872 nt   +upstreamnt  +downstreamnt
atggacgctgccaactcggtaacgccgggcgccgtgtcgcacatcctggcgcacccgtcg
acgggctccgacggcgccgtgccggatctcgtcgtccaggtcctcgacctcaagtccatc
ggcacgggcagccggttcagtttcatggcaaccgacgggaaggataagatcaaggcgatg
ttccccaccagcttcgcgtcggaggtccgctccggcaatctgaagaacctcggcctcatc
cgcatcctcgactacacttgcaacgccgtcaacggcaacaatggcaaagtcttgattgtc
atcaaatgcgagcttgtgtgccaagcgctcgacgccgagatcaacggcgaggccaagaaa
gaggagcctccaattgtgctgaagcctaaggacgaaggcgtggtcgtggctgagcaggca
aatgctcccccagtcgcgattaagcccaagcaggagttgaagtccgcgtcccagatcgtg
aacgagcagcgtggaaatgctgctcctgctgcgcgcctttccatgacaaggagggtccat
cctttgatcactctgaacccctaccagggtaactgggtcattaaggtgcgggtcacgagc
aaaggcaacctgagaacctacaggaatgctcgtggagaaggctgtgtcttcaatgtagag
ctcactgatgaggatggcacccagatccaggccaccatgttcaatgaggctgcaaagaag
ttctatccaatttttgagctgggaaaggtctattatgtctcaaaaggatctcttagaatt
gccaacaagcagttcaagactgttcaaaatgactatgagatgtcactaaacgagaatgct
attgttgaagaagcagagggggaaactttcattccgcaagtgcaatacaactttgtcaag
attgatcatctaggaacatatgttggtggcagggaacttgttgatattatcggtgtggtt
cagagtgtatctcccacactcagcgttaggagaaagattgacaatgagacaataccaaag
cgtgacattgttgtagcagatgactctggcaaaactgttagtatttctctctggaatgat
cttgctactactactggccaagagcttttggacatggttgacagttctcctgttgttgcg
ataaagagcctaaaagtatctgatttccaaggcgtgtcactttcaactataggcagaagc
actcttgctattaatccagacctgcctgaggctcagaatgttaaatcatggtatgactct
gaaggcaaagatacttcactagcaccaattggtgcagaaatgggtgctgcacgggctggt
ggcctgaagtccatgtattctgatagagtttttctgtctcacatcaccagtgatcctgct
atgggccaggaaaagcctgttttcttcagtttaaatgccatcataagccacatcaagcct
gaccagaatatgtggtaccgtgcttgcaagacctgcaacaagaaggtgactgaagctttt
ggatctggatactggtgtgagggatgccaaaagaacgactctgaatgctcactgagatac
ataatggtcctcaagatctctgatcccactggtgaggcatgggtgtccgtgttcaacgag
catgctgagaagatcattggctgcagcgctgacgagcttgatcggatcaggaaagaggag
ggcgatgacagttacattctcaagctcaaggaagccacctgggttcctcaccttttccgc
gtcagcgtcacgcagcatgaatacatgaacgagaaaaggcagaggatcaccgtgaggagt
gaagcaccggtcgactatgcagctgaatccaagtacctgcttgaagagatcgcgaagctt
actgcttgctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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