KEGG T01086: 8057552

Sorghum bicolor (sorghum): 8057552

Entry

8057552           CDS       T01086

Name

(RefSeq) homeobox-leucine zipper protein ROC4

K09338

homeobox-leucine zipper protein

Organism

sbi Sorghum bicolor (sorghum)

Brite

KEGG Orthology (KO) [BR:sbi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sbi03000]
    8057552
Transcription factors [BR:sbi03000]
Eukaryotic type
  Helix-turn-helix
   Homeo domain other
    8057552

SSDB

Motif

Pfam:

START Homeodomain Homeobox_KN

Other DBs

NCBI-GeneID:

8057552

NCBI-ProteinID:

XP_021317935

Position

6:complement(53818243..53824365)

AA seq 802 aa
MSFGDLLDGGGSAAGVQFPYGVFASSPALSLAVVDAGRRRDGGSAARAGSSARRGGGGNG
KDASEAENEGQSMVSGHLDVVLSGGGDGEDDEDGEDANPRKRKRRYNRHTPHQIARLEAM
FKEFPHPDEKQRAELSKQLGLEPRQVKFWFQNRRTNAKNQMERQENARLKQENDKLRVEN
LSIREAMRDLVCSGCGGPAVLGDLSLEERHLRLENARLRDELARVCTLTAKFIGKPMSHM
ELLAVAEEPHPMPGSSLELAVAGGVGSGVPSSKMPVSTISELAGSTSSAMGTVITPMVTA
SLPMVSIDKSKFAQLAVSAMNELVKMAQTNEPLWIPSASSPGSPTMETLNFKEYLKAFTP
CVGVKRNGFVSEASRESGIVTVDSSAALVEAFMDERRWSDMFSCIVAKAATIEEISPGVA
GSRNGALLLMQAELQVLSPLVPIREVTFLRFCKQLAESAWAVVDVSIDGLQMDHCLATNT
KCRRLPSGCVLQDTPNGCKVTWVEHAEYPEASVHQLYQPLLCSGLALGAGRWLATLQRQC
ECLAILMSSLAVPEHDSEAVSLEGKRSLLKLARRMMENFCAGMSASSSCEWSILDGLTGS
MGKDVRVMVQNSVDEPGVPPGVVLSVATAVWLPVTPERLFNFLRDEELRAEWDILSNGGP
MQQMLRITKGQLDGNSVTLLRADHTNSHLNSILILQETCTDRSGAMVVYAPVDFPAMQLV
IGGGDSTNVALLPSGFVILPDGSSSSAGGVGHKTCGSLLTVAFQILVNSQPTAKLTVESV
DTVYNLISCTIEKIRAALHCDI

NT seq 2409 nt +upstreamnt +downstreamnt
atgagcttcggcgatctcctcgacggcggcgggtccgcggctggcgtgcagttcccgtac
ggcgtcttcgcgtcatcgccggccctctccctcgccgtggtggacgccgggcgccgccgc
gacggcggcagcgctgcgcgggcgggctcgtcggcccgccgaggcggcggaggaaacggg
aaggacgcgtcggaggcggagaacgagggccagtcgatggtgagcggacacctcgacgtc
gtcttgtctggcggcggcgatggcgaggacgacgaggacggcgaggacgcgaacccgcgc
aagcgcaagaggcggtacaaccgccacacgccgcatcagatcgcacggctcgaagcgatg
ttcaaggaattcccccacccggacgagaagcagcgcgcggagctgagcaagcagctgggc
ctggagccgcggcaggtcaagttctggttccagaaccggcgcacgaatgcgaagaaccaa
atggagcggcaggagaacgcacggctgaagcaggagaacgacaagctgcgtgtcgagaac
ctgtccatccgggaggccatgagggacctggtgtgcagcggctgtggcggcccagcggtg
ctcggggacctgtcgctcgaagagcgccacctgcgcctcgagaacgcgaggctcagggac
gagctcgctcgagtctgcaccctcactgccaagttcattggcaagcccatgtctcacatg
gaactgctcgcggtcgcggaggagccgcatcctatgccaggctcgtcactggaacttgca
gttgctggtggtgttggttccggcgtcccatcgagcaaaatgcccgtctcgacgatctct
gagttggctggcagcacatccagcgcaatgggaacagtgatcacgcccatggtgactgca
tcattgccgatggttagcattgacaagtccaagttcgcccagcttgcagtgagtgcgatg
aatgagcttgtcaagatggcgcagacgaatgaaccgctgtggattccaagcgcttcctca
cctggctcgccaaccatggagactctaaacttcaaagagtacttgaaggcattcacgccg
tgtgttggagtgaaacgtaatgggtttgtgtctgaggcctctagggagtccggcattgtc
accgttgacagtagcgctgctcttgtggaggccttcatggatgagagacgatggtcagac
atgttctcctgcattgttgccaaggcagccaccattgaggagatctcacctggtgttgca
ggaagcagaaatggtgcattgctgcttatgcaggcagaactacaagtgctttcacctctt
gtccctataagggaggtaacatttcttaggttctgcaaacagcttgctgagagtgcatgg
gctgtagtggatgtttccattgatggactgcagatggatcactgcctcgctacaaacacg
aaatgccggaggctgccttcaggttgcgtgttgcaagatacccccaatggatgcaaggtc
acatgggttgagcatgctgaatatcctgaggcatccgtgcaccagctctaccagcctctt
ctgtgctctggtctcgcccttggtgcagggcggtggcttgcaacactgcaacgccagtgt
gagtgtttggccatcctcatgtcatcgcttgcagtgccagagcatgactcagaagcggtt
tctctggaaggaaaacggagcttgttgaagttggcacggaggatgatggagaacttctgc
gcagggatgagtgcgtcatcttcctgtgaatggagtatactggatggcttaacaggtagc
atggggaaagatgtacgtgtcatggtacagaacagtgtggatgaacctggggtgccacca
ggtgtggtgcttagtgttgccacagcagtatggttgcctgtgacacctgagcggctcttc
aactttcttcgcgatgaggagctccgtgctgaatgggacatcctcagcaatggtggccct
atgcagcagatgttacgcattaccaaggggcaactggatggcaactctgtaactctactg
agagctgatcatacaaactcccacctgaacagcatcttgattctacaagagacgtgcact
gacagatctggtgcaatggtcgtgtatgcccccgtggacttcccggcaatgcagcttgtg
attggtggaggggactcaacgaatgtggcactcctgccatctggtttcgtcattctgcct
gatgggtctagctctagcgctggtggggttgggcacaagacatgcggatcgctgctcacg
gttgcattccagatccttgtgaacagccagcccacagcaaagctcacggtggagtcagtg
gacaccgtgtacaacctcatctcttgtaccatcgagaagatcagggcggcacttcactgt
gacatctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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