KEGG   Sorghum bicolor (sorghum): 8063057
Entry
8063057           CDS       T01086                                 
Name
(RefSeq) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    8063057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8063057
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     8063057
 Prokaryotic type
  Archaeal type
    TFB
     8063057
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N Ribosomal_S27e zf-ribbon_3 RB_B LysW-like_globular Zn-ribbon_8
Other DBs
NCBI-GeneID: 8063057
NCBI-ProteinID: XP_002460572
UniProt: A0A921UV75 C5X694
Position
2:65966080..65970579
AA seq 312 aa
MSDSFCPDCKKQTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG
GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL
DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYAARLIPNTY
AKEEDLKNLCTP
NT seq 939 nt   +upstreamnt  +downstreamnt
atgagcgactccttctgccccgactgcaagaagcagacggaggtggcgttcgaccactcg
gcgggggacacggtgtgcaccgagtgcggcctcgtcctcgaggcgcactccgtcgacgag
acctccgagtggcgcaccttcgccaacgagtccaacgacaacgaccccgtccgtgtcggc
ggccccaccaacccgctcctcaccgatggcggcctctccaccgtcatcgccaagcccaac
ggcgcgcagggcgagttcctctcctcctccctcggcaggtggcagaaccgcggctccaac
cccgaccgatccctcatcctcgccttccgcaccatcgccaacatggctgacaggctaggt
cttgtggctactatcaaggaccgagcaaatgaaatctacaagaaagttgaagatctcaag
tctatcaggggaagaaatcaagatgccatattagctgcatgtctatatattgcttgtaga
caagaagatcggcctagaactgtgaaagaaatatgttcagttgctaatggggccacaaag
aaagaaattggcagagcaaaagaatttatagtgaaacaactggaagttgagatggggcaa
tctatggagatgggaacaattcatgctggagattttctgaggcgtttctgctcaactctt
gggatgaacaatcaagctgttaaggcagcccaggaggcagttcagcgctcagaggagctt
gatataaggaggagcccaatctcaattgcagcagctgtcatttatatgataacccaactc
tcagaggacaagaagccacttaaagatatatccttggctactggtgtggcagaaggcacc
atcagaaattcgtacaaggatctatatccctatgccgcaaggctcatcccaaatacctac
gccaaggaagaagacctgaagaatctctgcacaccttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system