KEGG   Sorghum bicolor (sorghum): 8067493
Entry
8067493           CDS       T01086                                 
Name
(RefSeq) uncharacterized protein LOC8067493
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    8067493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8067493
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     8067493
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     8067493
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 8067493
NCBI-ProteinID: XP_002441360
UniProt: C5Z0U7 A0A921QBN0
Position
9:complement(54466144..54472453)
AA seq 802 aa
MRGVRADGGGGGAGGGGPSSSSTADNSRFDAAQYSFFGKAPMQGAELGGLLDGGVDGDGG
GFGGPDDGGYQFSSTGEEIDCISNLSEIDDLASTFAMLNRSISGTRNPGVIGDRRSISRE
SSLTADWAQDADFSNWVDQDILDGDESLDSKQWCSQLQSSSHFGESKPLSRTSSYPNQPL
QHRSSEPILLHRSTSFTSYPPPGGSPALPYPAQGLTRHSSIPSPGAGHHMGSPSSSLSGS
PYHMPGLSHGLPYGRSMSYTTGDLSMNNVLQNEWSNQAGPLAFDHLNRRHSLLQPQLSVP
SSSMSSLLFSQQHQRLPPGQPPLQNYINMQPHLFYHHQSPDVPSPRDKRSRSGRGKHNIR
FSQQPSDAGSQNSESSGIKFRSKYMSSEEIESILKMQHSGNHSNDPYIDDYYHQACKAKR
SVTSQKSNFCPMSIKDFPSKSRSGVDQHSYLQVDANGGVSFSAIRRPRPLLEADLPGSGD
GFYDHKSSTRPLEKEPMLAARITVEDSLRLLLDVDDIDRFLQSSQPQDSSFQLKRRRQVL
LEGLATSLQLVDPFGPNKPGHSGGLAPKDDLIFLRIVSLPKGRKLLARYLRLLVSGSELT
RIVCMAVFRHLRSLFGGLPSDSSAAETTIGLAKTVSSCVHHMELSALSACLAAVVCSSQQ
PPLRPLGSAAGDGASVVIKSVLDRATVLLADPHSAANYSRSARSLWQASFDAFFGLLTKY
CDSKYESIVQRFAMQGSNSMGGPETTKAVSREMPVELLRASLPHTNEQHRQTLLDFARKS
THVSGFSPNASRGLINSESVPG
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgaggggcgttagggcggatggtggcggtggcggcgccggaggcggaggtccgtcctcg
tcttccaccgcagacaactcgcgcttcgacgcggcgcagtactccttcttcggcaaggcg
cccatgcagggggcggagctcggtggccttttggatggaggtgtagacggcgatggtggt
ggattcggtggacctgatgatggtggctaccagttctcttctacaggcgaggagattgat
tgtatcagtaacttgtcggaaattgatgatcttgcaagcacttttgcaatgttgaaccga
agtattagcgggacaaggaatcctggagttattggtgacagacgatcaatttcgagggaa
agttctttgactgctgattgggctcaagatgctgacttctccaattgggtagatcaggat
atactagatggtgatgaatccctggacagcaaacaatggtgctcgcagctgcaatcttca
tctcactttggagagtctaaaccactgtctcgtacatcttcatatcccaatcaaccacta
cagcaccgctcaagtgaacctattcttttgcacagatctacttcatttacatcctatcca
ccaccaggtggaagtcctgcattgccttatcctgctcaaggtcttacacggcactcaagc
attccatcacctggtgctggtcaccacatgggttctccgagttcatcgctttctggttcc
ccatatcatatgcctggtctatctcatggactgccttatggacgaagcatgtcttacacc
actggagatctgtcaatgaacaatgtcctacaaaatgagtggtcaaaccaagctggccca
cttgcctttgatcatcttaaccggcggcacagtttattgcagccacagttatctgttcca
agtagctcaatgtcttcattgcttttttctcagcagcaccagagattaccaccaggccag
ccgcctcttcagaattacataaacatgcagcctcacctattctatcatcaccaatctcct
gatgttccttcaccaagagacaagcgatcaaggtcaggaagaggaaagcacaacatacgc
ttttctcaacagccttctgatgcaggtagccagaatagtgagagttcagggataaagttc
agatccaagtacatgtcatctgaagagattgaaagtatcttaaaaatgcagcactctgga
aatcacagcaatgatccttacatcgatgactattaccaccaagcttgcaaagccaaaaga
tctgtaacttctcagaagtccaatttctgccctatgtcaataaaggacttcccctcaaaa
tcccggtctggtgttgatcagcattcatatctacaggttgacgctaatggaggagtttca
ttctctgccatacgtagacctcgccctcttcttgaagctgatttgcctggatctggtgat
ggtttttatgatcataagtcatccacaaggccgctggagaaagaaccaatgcttgcagcc
agaataaccgttgaagattctcttcgtcttcttctggatgttgatgatattgatcggttt
ttacagtctagccagccacaggatagcagtttccaactgaagcgaaggcgacaggtcctg
cttgaaggcttagctacatcacttcagcttgttgacccttttggccccaacaaacctggc
cattcaggtggattggcccctaaggatgacctaatttttcttcgtattgtttctctgccc
aaaggacggaagcttttggcgcgctatcttagacttcttgtctctggaagtgagctgacc
cggatagtttgcatggctgttttccgacatcttaggagcttgtttgggggcttgccgtca
gactctagtgctgcagaaacaaccattggtcttgccaagactgtttcctcttgtgtgcac
catatggaactcagtgctctgagtgcctgccttgcagctgttgtctgttcatcgcagcaa
ccacctctccgaccacttggtagtgctgctggtgatggggcctctgtggtaatcaaatct
gtgctggatagagcgactgtgctactggctgatcctcattccgcagccaactacagcaga
tcagcacgttcactttggcaagcatcatttgatgccttctttggactcctgacgaagtac
tgtgacagcaagtatgaaagtattgtgcagaggtttgccatgcagggatccaactccatg
ggaggacctgaaaccaccaaagcagtcagcagggaaatgcctgttgagctgttacgtgca
agtcttcctcatactaatgaacagcatcgtcagacactgctagattttgctcggaaatct
acacatgtatctggtttcagtcctaatgctagccgtggactcatcaattctgaatcagtt
ccaggttaa

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