KEGG   Sorghum bicolor (sorghum): 8068019
Entry
8068019           CDS       T01086                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 11
  KO
K03135  transcription initiation factor TFIID subunit 11
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    8068019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8068019
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     8068019
SSDB
Motif
Pfam: TAFII28 RPN2_C
Other DBs
NCBI-GeneID: 8068019
NCBI-ProteinID: XP_002456149
UniProt: C5XGR0
Position
3:59576531..59579214
AA seq 209 aa
MKDPFEAAVEEQDSPPESPAPAEEEPGAAGPADDPEDYDGGGPRGLAPRQPSAPASHAAA
AAAKAKGRVQREQQEDDDDEEDQMEVDLEKLPSSTGDPDKLAKMNAILSQFTEQQMNRYE
SFRRSGFQKSNMKRLLVGITGSQKISIPTSIVVSGIAKMFVGELIETARVVMTERKDSGP
IRPCHIREAYRRLKLEGKIPRRSVPRLFR
NT seq 630 nt   +upstreamnt  +downstreamnt
atgaaggacccgttcgaggcggccgtcgaggagcaggactcgccgccggagtcgccggcg
ccggccgaggaggaacccggcgccgcgggccccgcggacgaccccgaggactacgacggc
ggcggcccgcggggcctggccccgcgccagccgtcggccccggcgtcgcacgcagccgcc
gccgcggctaaggccaagggccgggtccagagggagcagcaggaggatgacgacgatgag
gaggaccagatggaggtcgacctcgagaagctgcccagcagcactggcgaccccgacaag
ctcgccaagatgaatgctatactgtcccaatttacagaacagcagatgaaccgttatgag
tcattccgaagatctggatttcagaaatctaacatgaaaaggctgttggtaggcatcact
ggaagtcagaagatttctatccctacatcaattgtggtatcaggaatagcaaaaatgttt
gttggtgagctaattgaaacagcaagagtagttatgactgagaggaaggattcaggaccc
attaggccttgccacatcagggaagcatacagaagattgaagcttgaaggcaagatccca
cggcgatctgttcctaggctcttccgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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