KEGG   Sorghum bicolor (sorghum): 8072335
Entry
8072335           CDS       T01086                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    8072335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8072335
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     8072335
SSDB
Motif
Pfam: Rcd1
Other DBs
NCBI-GeneID: 8072335
NCBI-ProteinID: XP_002448518
UniProt: C5YFQ1
Position
6:complement(56161687..56166895)
AA seq 321 aa
MANIPPSFAGVSPPSPSPMAGSSGGLAPGQAAKDKKMASAEQLVLELCDPELRENALLEL
SKKREIFQDLAPLLWHSFGTIAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVAS
HPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVISFLLQTE
IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLAD
QPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHN
VTGGGMGGGPQPGMDPMNMGI
NT seq 966 nt   +upstreamnt  +downstreamnt
atggcgaacattcccccctccttcgccggggtctcgccgccgtccccctctccgatggct
ggaagcagcggtggcctggccccgggccaggcggccaaggataagaagatggcgtcggcg
gagcagctggtcctggagctctgcgaccctgaactgcgcgagaacgcgctgcttgagctc
tccaagaaaagggagatttttcaagatcttgccccgctgctttggcactcgtttggcaca
attgctgcactactccaggagattatttctatttacccgtcactctcaccccctacgctg
tcacctggagcatcaaaccgagtttgcaatgctcttgcacttctgcagtgtgttgcatcg
caccctgagaccaggatccttttcttaaatgctcatattccactgtacctgtacccattc
ctcaacactaccagcaaaacgagaccttttgagtacctaaggcttactagcttgggggtc
atcggtgctcttgtcaaggttgatgatactgaagtcatcagttttttgctgcaaactgaa
ataattcctctgtgcttgcgaaccatggagatgggtagtgagctatccaaaactgtggca
actttcattgtccaaaagattcttctagatgatgttgggctgcgctacatttgtgccact
gctgagcgcttctttgctgtaggcagtgttttagcaaacatggttgtttcacttgctgat
cagccctccacaaggctgctgaagcacatcattcgctgttacctcaggctgtcagataac
cctagggcctgtgctgcattgcagagctgccttccagacatgctcaaagatgggacattc
aataactgtcttagggatgatccagcgacaaggcgctggctccaacagctcctgcacaat
gtgacaggcggaggcatgggaggaggtcctcaaccaggcatggatcccatgaacatggga
atatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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