KEGG T01086: 8074468

Sorghum bicolor (sorghum): 8074468

Entry

8074468           CDS       T01086

Name

(RefSeq) nuclear pore complex protein NUP214 isoform X1

K14317

nuclear pore complex protein Nup214

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi03013

Nucleocytoplasmic transport

Brite

KEGG Orthology (KO) [BR:sbi00001]
09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    8074468
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8074468
Messenger RNA biogenesis [BR:sbi03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     8074468

SSDB

Motif

Pfam:

TACC_C GIT_CC

Other DBs

NCBI-GeneID:

8074468

NCBI-ProteinID:

XP_021308151

Position

2:complement(76948304..76959858)

AA seq 1762 aa
MGAPRELELSDEVEGEEEGTTDFVFRLAGDPIPLLPTDSNPLPLFDLLSPPARPLAVSDR
HATVFLAHPSGFIVVRTKELIEASKEAREKGKASTRCAQDCCVADVPLPGVSLIALSHDE
SVLAACTDTEIQFFSLASLLTHKDVVPSSSCSLGRAGTVKDFKWLNHASAAYIVLSNGGL
LCHGSLGEGLKDVMENVDAVDCCKEGNHIAVARGNKLTILSPDFKETCSMSLLFQLWSDE
SDSEGTTIKVDSIGWVHGDSIVIGSVRLNEDDNEEGYLVQVIRTEESTFCESPGKPDVYT
YVDFFHGIMDDILPSGVGPNLLLGYLHRWDLMVASNKKSIDDHIALLKWPSAHDDEKTVT
YLEMLEDKYSPRIDLQENGDDNVILGFGVENVSLFQKITVTVGPEQREVAPQHILLCLTG
EGKLAVYYLARISDPSDLPHATVSTNEDYGEKHISPAAVPGKKLTPSVTGSVSKSTLTEH
GAEASIAQTGSNQHESMNVKNSSSASKEQETTGNSLLISSNKKPIVDTKQLNVTAPPAAL
PSLELTGNTKPTISSSFSTVNNEGMNPTGGNAPNGLAPSLQPSSRSFGNSQTGKEGLDSA
QSVGIFGGSQNSNKDGDVYGFKSSGFTSSGSVPAKIGERNEVGFGVPSPQTSYTIDRKVF
GAPVALSSVPSPSISPAKSAPVGSSIGFRTGNSEAPQSLRGSPPSQQSMGKSYNSRTQTP
ADYSRNSKMGTRFDSEQDLSKKFYSINEMTKELDALLAYIEKDGGFRDACITFQQRPLSM
FEDSLQNFLELLQVFKGKVEEQCSKVEDLRNKMFQVSARQTYMKGIVSQSSDNQYWDIWN
RQKLSPEFEVKRQNILKANQNLTNQLVELERHFNNLEMNRSSETGRVASNRRAVYSNKTR
SSQTQLSSVYNALNSQLAAAEQLSECLSKQISVLNIGSPTRKQGTVTKELFESIGLAHTT
DATKFSGSTPKPVKRFPSVNEHSKGILGPSKSGEPETARRRRESLDMSLASLEPQKTTVK
RIAQQQRLKISSDLPFRSNKKIFDSQMAAISQEKSSDSSNSSIVESYVSRLHSLSEVSDV
KEKPSEPQQNPLFKWIKESTGSSQISEQKHIELPGQMKSTAHSSKLTPSSPPSFSYTRMG
AQDSINPSSVPSFGTKHTVSKPNTLTFKTTITPKSNASTEPNILPSITASKTSQSPLSVK
TTGESGDLPTLTMKNRQDSQSMKSLGNIKGPGASLQNKGGIFRDLGKSSFTSEHSKPAVL
HEKTGQLSGVGDAVQNTVKDTPKMAPQPSAFSSAPVTQTDSYSLRSTVYSSATSASSGAK
TSEVLSSSVQKVSPIVARGTVSSSIPTPAKDSSTGLSQNASKPEMLISEVTSTILSASST
SVISTTESKPSVPPTTGASLPSAHVSVPKTAPTTSESVVTSTGKDGGPNTDTIAADEDDM
EEEAPSASAELNFGALGGFSLGSQPSSSPQKSNPFGASFGTSDNKSSGTPFTLTTSPGQL
FRPASLSIPSAQPAQQPSQSTSSSSFSSTFSSGLTGFGQPAQIGSGQQSAFGKPAQIGAG
QQAGFGQAAQIQSGFGQPAQIQSGFGQSAQIGSGQQSGFGQPAQIGAVQSGFGQPAQFGA
QQALGSVLGSFGQSRQLGGVGSGGFGGFASASTSGGFGSLSSSNAGFAGAATVGGFSAPA
ASAGGGFAAATGGGFAALASKSGGFAGAASSGGGFAGAAQGGGFGSGGGFGSFGGNQGAG
FSAFGASGTGRPPADFLTQMRK

NT seq 5289 nt +upstreamnt +downstreamnt
atgggggcgccgcgcgagctcgagctctccgacgaggtggagggcgaggaggaaggcacc
accgacttcgtcttccgcctcgctggcgaccccatcccgctcctcccgactgactccaac
ccactcccgctcttcgacctgctgtcccctcccgctcgcccgctcgccgtctccgaccgc
cacgccaccgtcttcctcgcccaccccagcgggtttatagttgtgaggacgaaggagttg
atcgaagccagcaaggaggcgcgcgagaagggaaaggcgagcacccgctgcgcgcaggac
tgctgcgtcgccgacgtgcccctccctggtgtatccctcatcgcgctctcccatgatgag
tccgtgttagcagcctgcacggatacagagatccagttcttctctttggcgtctctgctc
acacataaggatgtggtaccatcgtcatcatgtagcttgggacgagctggcactgtgaaa
gatttcaagtggttaaatcatgcctctgcagcatatattgtactctcaaatggtggtttg
ctgtgtcatgggagtttgggtgaaggcctgaaggatgtgatggaaaatgtcgatgcagtt
gattgttgcaaggaaggaaatcatattgctgttgcaagagggaacaaacttaccatatta
tcaccagattttaaggaaacatgctccatgtccctcttgttccagttgtggtctgatgaa
agtgattcagagggcactaccatcaaagtggattccattggctgggtacatggtgatagt
attgttattgggtctgttcgattgaatgaagatgacaatgaagaaggctatcttgttcaa
gttataaggactgaagaaagcacattttgtgagagcccaggcaagccagatgtttatacc
tatgtcgattttttccacggcattatggatgatattttaccatctggagttggacctaat
ctgcttttgggttatctgcatcgctgggatctcatggtggcttccaataaaaagagcatt
gatgaccacattgcccttctgaagtggccatctgcccatgatgatgaaaaaactgtaaca
tatcttgaaatgttggaggataaatacagtcctaggattgacttgcaagagaatggcgat
gacaacgtcatactagggtttggtgttgagaatgtttcattatttcaaaagatcactgta
acagttggacctgaacaaagggaggttgcccctcaacatattctactctgtttgactggt
gaaggcaaactagctgtgtattacctcgccaggatttcggacccttctgatttacctcat
gctactgtgtctaccaatgaggactacggtgaaaaacatatttcacctgcagctgtacct
ggaaagaagttgactccaagtgttacaggctcggtatctaagagtactctcactgaacat
ggtgctgaggcctctattgcacaaacaggtagcaatcagcatgaatcaatgaatgtgaaa
aatagtagctcagcttcaaaagaacaggaaacaactggcaattcgttgcttatctcttcc
aataagaagcccatagtagacaccaagcaactgaatgtgactgctccacctgcagccttg
cctagcttagaattaacaggaaacacaaaacctacaatatcttccagcttttctactgtc
aataatgaaggcatgaatccaacaggaggcaatgcacctaatggattagctccttccttg
caaccaagcagcagaagttttggaaacagccaaactggtaaagaaggcctggattcagct
caatcagtgggaatatttggtggatctcaaaactccaataaagatggcgatgtctatggt
ttcaagtcttcagggttcacctctagtggatctgtccctgccaagatcggagaaaggaac
gaggttggttttggagttccttcaccgcaaaccagctacaccattgatagaaaagttttt
ggtgctccagttgccttaagttctgtaccttcaccatcgatatctccagctaaatctgcc
ccagttggatcttcaattggatttcggacaggaaactcagaagctcctcaatcattgcgt
ggatcacctccgtcacagcaatctatgggcaaatcatataacagcaggacacaaacacca
gcagactattctagaaactccaaaatgggcacaagatttgattctgaacaagacttatct
aaaaagttttatagtataaatgaaatgacgaaggagttagatgcgctactagcatacata
gaaaaggatggtggttttagagatgcctgcataaccttccagcagcgtcctctttctatg
tttgaggatagcttgcaaaactttttggagttgttgcaggtcttcaagggcaaagtagag
gaacaatgttcaaaagttgaagatctgaggaacaagatgtttcaagtttctgctaggcaa
acttacatgaaaggaattgttagccagtcttcagataatcagtactgggatatatggaac
cgtcagaaattgagtccagaattcgaagtgaagagacaaaatattctcaaagctaaccag
aatttgacaaatcagttggttgagctggagaggcacttcaataatctggagatgaacaga
tccagtgaaacaggaagagtagcttctaatcgaagagctgtttattctaataagacaagg
tctagtcagacacaattatccagtgtatataatgcactgaactcgcagttggcagctgct
gagcagctatctgaatgcctttcaaagcagatatctgtgttaaatattggttctcctact
aggaagcaggggaccgtgaccaaagagttgtttgagtcaattggtttagcccacacaacc
gatgcaaccaaattttcaggcagcactcctaagccagttaagcggtttccatcagtgaat
gagcattcaaagggaatattagggccttccaagagtggtgagcccgagaccgctcgaagg
aggagagaatcactggatatgagcctggctagtttggaacctcagaaaacaactgttaaa
agaatagcacagcaacaacgcctcaaaatcagcagtgatctaccattcaggtcaaacaag
aaaatttttgattctcaaatggcagcaatatcacaggaaaagtcaagcgatagctccaat
tcatctatagtagaatcatatgtaagcagactgcattctctgagtgaagtttcagatgta
aaagaaaaaccgtcagaaccccaacagaaccctttgttcaaatggataaaggaatcaact
gggtcatctcaaatctcagagcaaaagcatattgagttaccagggcaaatgaaaagcact
gcacattcttcaaagttgacaccatcttcaccaccatcattcagctacacccgtatgggt
gcacaagatagtatcaacccatccagtgttccatcctttggaacaaaacatactgtgtct
aagccaaatactttaaccttcaaaaccactataacccctaaaagtaatgccagcacagag
ccaaatatattaccttccataacagcgtcaaaaacttctcagagtccactgtctgtgaaa
actactggggaatctggagatttgcctacattaactatgaagaacagacaggatagtcag
tcaatgaaatctttggggaacataaaaggaccgggtgcttctctgcagaacaagggtggc
atatttagagatcttggcaaatcgtcttttacttctgaacattccaagccggctgtatta
catgagaagactggccagcttagtggggttggcgatgctgtgcagaacactgtgaaagat
acccccaagatggcacctcaaccttctgcattctcgtcagctcctgttactcagactgat
tcatactccttaaggtcgactgtttactcttcagccacatcagcctcgtcaggtgcgaaa
acttcggaagttttatctagctcagtgcagaaagtttctccaatagtagccaggggtact
gtgtctagctcaatccctactcctgctaaggattcgtcaactggcttgagtcaaaatgct
tccaaaccagaaatgctaatatcggaggtaactagtaccatactttctgcaagttcgact
tcagtcatatcaaccactgaaagtaaaccttctgtgcctccaacaactggtgccagcttg
ccttctgctcatgtctctgttcctaaaacagcgccaacaacatcagaatcagttgtcact
tccacaggaaaagatggaggaccaaacactgacaccatcgcagccgatgaagatgatatg
gaagaggaggcgccttctgcaagtgccgaactcaactttggagcccttggtggattcagc
ctcgggtcccagccttcttcaagtcctcaaaagtctaatccttttggtgcctcctttggt
acatctgacaataaaagttcaggcacaccatttactttgacaaccagtccaggacagctt
ttccgaccagcgtcgctaagcattccttcagctcagccagcccaacaaccatctcaatca
actagttctagttctttttctagtacattctcaagtgggcttactggatttggacagcct
gcacaaattggatctggccagcagtcagcatttgggaagcctgcacagattggagctggt
cagcaggcaggatttgggcaggcagcacaaattcaatccggatttggtcagcctgcacaa
attcaatctggttttggtcagtcagcacaaattggatctgggcaacagtcaggatttggg
cagcctgcacaaattggggctgtccagtcaggatttgggcagcctgcacagtttggtgct
caacaggcacttggatcagtgctgggttcttttggacaatcgcgccagttaggaggcgta
ggttctggaggatttggtggatttgctagtgcttctacatctgggggttttggttcttta
tcttcaagtaatgctggatttgctggtgctgcaacagttgggggcttttcagcacctgct
gcttctgcgggtggtggttttgctgctgctactggtggaggttttgctgctcttgcctcc
aaaagtggtggttttgctggtgcagcttcatctggtggtggttttgctggtgcggcccag
ggaggtggctttggcagtggtggtggattcggatcctttggtggtaatcaaggagctggg
ttctcggcatttggagcaagtggaactggaagaccgccagctgatttcttgacacagatg
agaaagtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF

DBGET integrated database retrieval system