KEGG   Sorghum bicolor (sorghum): 8075772
Entry
8075772           CDS       T01086                                 
Name
(RefSeq) protein transport protein Sec24-like CEF
  KO
K14007  protein transport protein SEC24
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    8075772
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbi04131]
    8075772
Membrane trafficking [BR:sbi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    8075772
SSDB
Motif
Pfam: Sec23_trunk Sec23_BS Sec23_helical zf-Sec23_Sec24 Gelsolin
Other DBs
NCBI-GeneID: 8075772
NCBI-ProteinID: XP_021316869
Position
5:44114941..44135157
AA seq 1105 aa
MASTPPPQQQQQPPPPFAAQNPTAQGPVQGPPGSGAGALPGAFANLQISRGAAPPPGAPR
GLTPQQAPPAFAARPGPPPAAARPAFPGSPPAPPFVRAPTAATSASPPFGGQPGVVSQPP
PPFGGPPGASQPPPPFGVPPGAVSQAPPPFVGLPAVASQAPPSFGGPPATASQAPSPFVG
HSVAASQAAPFGGTPAAGSHPPPFGGPPVAGQQPALPLRPTFPGQSGPMAAAAAWTQPTP
PSFGAPQQPPPPFGSRPVGQPPFATQSAPVAQQLPFMGPPRANAPAFGPPSWQAQGAGSG
AMQPPMRMPGIPGSMQPNTLGPPGTPTIPYSPHAGTQVSTPSKIDPNQIPRPMPESSVII
YETRQGGQATIPPAASSEFIVKDTGNCSPRLMRCTVNQIPCTGDLLTTSGMPLALMVQPF
SLPHPSEEPIQLVDFGEMGPIRCSRCKAYINPFMKFVDQGRHFICNLCGFRNDTPRDYMC
NLGPDGRRRDADDRPELSRGTVEFVATKEFLVRDPMPAVYFFLIDVSMNAVQTGATAAAC
SAIAQAISDLPEGPRTMVGIATFDSAIHFYSLKRAQQQPLMLIVPDVQDVYTPLQTDLIL
PVSECRENLEQLLESIPNMFENNRVADSAFGAAMKAGFLAMKSTGGKLLVFQSVLPSLGI
GSLSAREAEGRANITTGDKEAHKLLQPVDNTLKTMALEFAEYQVCVDVFLTTQSYVDIAS
ISVVPQTTGGRVYYYYPFSALSDPAKLFNDLRWNISRPQGFEAVMRVRCSQGLQVQEYFG
NFCKRVPTDIDLPAIDSDKTVMVTFKHDDKLPENVECGFQCALLYTTVYGQRRIRVINLS
LSCTSLLANLFRCADLETQFACFLKQAANGIPTSPLPRIRDEATNTCINILQSYRKHCAS
VTSSGQLILPEALKLLPLYTLALVKSVGLRTDGRLDDRSYWISLVSSISVVLAVPLVFPR
LIPIHDLTSRDDDDSLVPSPLMLNSENVQEDGVYLLENGEDGLIYVGNMVNPGTLEQIFG
VSSLAALPVQLALDQFDNELSRKVNEVVNEIRRQRCSYLRLRLCRRGEPSGDFFRSFLIE
DKAPGVFSYVEFLVHVHRQIQSKMT
NT seq 3318 nt   +upstreamnt  +downstreamnt
atggcgtcgacgccgccgccgcagcagcagcagcagccgccgccgccgttcgccgcgcaa
aaccctaccgcgcagggcccggtccaggggccgccaggctcgggggcgggggctctcccc
ggggcgttcgccaacctccagatctcccgcggcgcggccccgccgcccggcgccccgcgg
gggctcacgccgcagcaggcaccacccgccttcgccgcgcgtccgggccctccgccggcc
gccgcccggcccgcgttccctgggagcccgcccgcaccgccgttcgtgcgggcgcctacg
gcggcgacttccgcctcgccgccctttggcggacaaccgggggtagtgtcccagccgccg
ccaccgttcggggggcctccaggtgcctctcagccgccgccgccgtttggtgttcctccc
ggggcggtgtcccaggcgccgcctccgttcgtaggccttcctgctgtggcgtcgcaggcc
cctccttcctttggaggccctcctgccacggcatcgcaggcgccttcgccctttgttggc
cactctgttgctgcgtctcaggcggcaccgttcggtggcacccctgctgcggggtcacat
cctccgccgttcggtgggccccctgtagcagggcagcagcccgcactgccactgcggccg
acattccctggccagtctgggccaatggcggcagcggcagcttggacgcagccaactcca
cctagctttggagccccgcagcagcctccaccaccatttggttcgcggccagttgggcag
ccgccctttgctacacaatcagcgcctgtggcacagcagctgccattcatggggccaccc
agggcaaatgccccagcgtttgggcctccatcttggcaagctcagggagctgggtctggt
gctatgcagccacctatgagaatgccaggcattcctggtagcatgcagccaaacacacta
ggaccccctggcaccccgactataccttattctccacatgctggaacccaggtctcaacc
ccgtccaaaattgatcctaatcaaattccacggccaatgcctgaatcatcagtcatcatt
tatgagacccgtcaaggtggccaagcaaccattcccccggctgcatctagtgaatttatt
gtgaaggacactgggaactgtagccctcgtttaatgcgctgcactgtgaatcagatacct
tgtactggtgatctcttgacgacttcgggtatgcctttagctctgatggttcaacctttt
tctcttcctcacccatctgaggaacctatacagcttgtggactttggagagatgggaccc
attcggtgttctcgttgcaaagcgtacataaatcctttcatgaaatttgttgatcaaggg
aggcatttcatctgtaacttatgtggattcagaaatgatactcctagagactacatgtgc
aacttagggcctgatggtaggcgacgtgatgctgatgacaggcctgaactgtctagagga
acagttgaatttgttgctacaaaggaatttctggttcgtgatccaatgcctgctgtatac
ttcttcctaattgatgtctccatgaatgctgtacaaactggtgcgactgctgcagcttgc
agtgctattgcccaggctatttcagatctgccggaaggtcctcggacaatggttggaatt
gcaacatttgattctgctattcacttctacagtcttaaacgtgctcagcagcagcctttg
atgctcatcgttcccgatgttcaagatgtatatacgccacttcagacagatcttattctc
ccagtttccgagtgccgggagaatctggagcagttgctagaaagtatcccaaacatgttt
gagaataatagggtcgctgattctgcttttggagcagcaatgaaggctggcttcctggcg
atgaaatctactggtggaaaacttctggtttttcaatcagtgctcccatcacttgggatt
ggttctttatctgcaagggaagccgaaggcagagcaaacattacaactggtgacaaggaa
gcccataaacttttgcagcctgttgacaacactctcaagacaatggcactagaatttgct
gagtatcaggtctgtgtagacgtattcctcaccacacaatcgtacgttgatattgcttct
atatccgttgtgcctcagactacaggtggccgggtctactactactatccattttctgct
ctttcagatccagccaagctcttcaatgatctcagatggaatatcagtagaccccagggt
tttgaggctgttatgcgtgtaaggtgcagtcagggtctccaagttcaggaatattttggc
aatttttgcaagcgtgttcccactgacattgatcttccagcgattgattctgacaaaact
gtgatggtcacgtttaaacatgatgacaagttaccagaaaatgtggaatgtggcttccag
tgtgcacttctgtatactactgtatatggacaaaggaggatccgagtcataaacctctca
ctttcatgcacaagtttgcttgctaatctttttcggtgtgctgatttggagacacagttt
gcatgcttcctgaagcaagctgctaatggcatcccgacatctccattacctcgtattcgg
gatgaagcaacaaatacatgcataaatattcttcaatcttaccgcaaacactgtgcatct
gtaacctcatcggggcagttgattctcccagaggctctaaaactgctgcccttatatact
ttggcactggtcaaaagtgtaggcttgagaaccgatgggcgattggatgatcgttcctat
tggatatctctagtctcatcaatttctgtagtactagctgttcctttggtgttccctaga
ttgattcctatccatgatctcacatcaagggatgatgatgattcccttgtacccagtccc
cttatgctcaatagtgaaaatgtacaagaggatggggtctatttattggagaatggtgag
gatggtctaatttatgtaggaaatatggtaaatccaggtaccctggaacaaatatttggt
gtctcttctttggctgcattaccagtccagttggcattggatcaatttgacaatgaactc
tcgaggaaggttaacgaagttgtaaatgaaataagacgccagaggtgctcatacttgagg
ttaagactatgcagaaggggtgaaccatctggtgattttttccggtcatttttaatagag
gacaaggcgcctggcgtcttctcctacgtggagttccttgtgcatgtccacaggcaaatc
caaagcaagatgacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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