KEGG   Sorghum bicolor (sorghum): 8078474
Entry
8078474           CDS       T01086                                 
Name
(RefSeq) ABC transporter C family member 3
  KO
K05665  ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    8078474
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sbi02000]
    8078474
Enzymes [BR:sbi01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.3  ABC-type glutathione-S-conjugate transporter
     8078474
Transporters [BR:sbi02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    8078474
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_29 MMR_HSR1 AAA_23 AAA_21 AAA_16 Dynamin_N DUF87 FtsK_SpoIIIE nSTAND1
Other DBs
NCBI-GeneID: 8078474
NCBI-ProteinID: XP_002457259
Position
3:complement(4519254..4525190)
AA seq 1512 aa
MPVSTAATPYAAPAMAATPAGEGPLFYFFFPLEPLVLHGVDAAVHVLLALAVAGRFLFRH
CGLSVAKDGEEARGGGPRGGGRFRCHGVAACATWALAAAEVLLAAYSCYLGATSGSGLSR
DAVVGLVDAAARAVAWLLLAAYLQFDFGRRREERFPASLRLWWAFFLLLSLVTVADHVAT
SLDGFLVPALSWVFDAVSVAAAVVLLCAGFVGRREGGGSAAEEPLLNGAHETADGNGRSD
AEASKFTGAGFFSVLTFSWMGPLLAVGHKKTLGLDDVPELDPGDSVSSLLPTFKANLEAL
AGGVSGSGRKAVTALKLTKALLRTVWWHVAVTAFYALVYNVSTYVGPYLIDSLVQYLNGD
ERYASKGQLLVLAFIVAKVFECLSQRHWFFRLQQAGIRARSTLVAVVYQKGLALSSQSRQ
SRTSGEMINIISVDADRVGIFSWYMHDLWLVPLQVGMALFILYSTLGLASLAALGATVVV
MLANVPPGQMQEKFQQKLMDCKDVRMKATSEILRNMRILKLQGWEMKFLSKIIELRKTET
NWLKKYLYTTTLVTFVFWGAPTFVAVVTFGACMLMGIPLESGKVLSALATFRVLQEPIYN
LPDTISMVIQTKVSLDRIASFLCLEELPTDSVQRLPNGSSDVAIEVTNGCFSWDASPELP
TLKDLNFQAQRGMRVAVCGTVGSGKSSLLSCILGEIPKLSGEVKICGMTAYVSQSAWIQS
GKIQENILFGKEMDKDKYERVLESCSLKKDLEILPFGDQTVIGERGINLSGGQKQRIQIA
RALYQEADIYLFDDPFSAVDAHTGSHLFKECLLGALSSKTVVYVTHQIEFLPAADLILVM
KDGKIAQAGKYNEILGSGEEFMELVGAHRDALAELDTIDAANRSSEGSPSSGTAKLIRSL
SSAEKKDKQDEGNNQSGQLVQEEEREKGRVGFWVYWKYLTLAYKGALVPLVLLAQLLFQV
LQIGSNYWMAWAAPVSKDVEPPVSMSTLIYVYIALAVGSSFCVLLRALFLVTASYKTATL
LFDKMHMSIFRAPMSFFDSTPSGRILNRASTDQSEVDTNIAPQMGSVAFAVIQLVGIIAV
MSQVAWQVFVVFIPVVATCFWYQRYYIDTARELQRLVGVCKAPIIQHFAESITGSTTIRS
FGKENQFVSANSHLMDAYSRPKFYNAGAMEWLCFRLDVLSSLTFAFSLIFLINLPPGFID
PGIAGLAVTYGLNLNMLQAWVVWSMCNLENKIISVERILQYISIPAEPPLSMSEDKLALA
HNWPSEGEIQLHDLHVKYAPQLPFVLKGLTVTFPGGLKTGIVGRTGSGKSTLIQALFRIV
DPTIGQILIDGVDICTIGLHDLRSRLSIIPQEPTMFEGTVRSNLDPLGEYTDSQIWEALD
CCQLGDEVRRKEHKLDSPVIENGENWSVGQRQLVCLGRVILKRSKILVLDEATASVDTAT
DNLIQKTLRQQFSEATVITIAHRITSVLDSDMVLLLDNGVAVERDTPAKLLEDKSSLFSK
LVAEYTMRSTHT
NT seq 4539 nt   +upstreamnt  +downstreamnt
atgcccgtgtccactgccgcgacgccttacgcggcgcccgcgatggcggcgacgccggcg
ggcgaaggccccctcttctacttcttcttccccttggagccgctcgtcctccacggcgtg
gacgctgcggtccacgtcctcctcgcgcttgccgtcgcggggcggtttctgttccgccac
tgcggcctctccgtcgccaaggacggggaggaggcgcgtggaggcggcccccgcggtgga
ggccggttccggtgccacggtgtcgcggcctgtgccacgtgggccctggcggcggccgag
gtcctgctcgcggcctactcgtgctacctgggcgccacctccggctccgggttgtcgcgt
gacgcggtggtgggtctcgtggacgcggccgcgcgcgcggtggcgtggctgctgctcgcc
gcgtacctgcagttcgacttcgggcggcggcgcgaggagcggttcccggcgtcgctcagg
ctctggtgggcgttcttcctcctgctctccctcgtgaccgtggctgaccacgtggcgacg
agcctcgatgggttcctggtgcccgcgctctcgtgggtgttcgacgccgtctcggttgct
gctgccgtggtcctgctctgcgctgggttcgtaggcaggagggagggaggcggctctgct
gccgaggagcctctgctcaacggtgctcatgagacggcggacggtaacggccgcagcgat
gccgaggcgtccaagttcaccggcgctggcttcttcagcgtgctcaccttctcgtggatg
gggcctcttctcgccgtcggccacaagaagaccctcggcctggacgacgtccctgagctc
gaccccggggacagtgtctccagcttgctcccgacgttcaaggccaacctcgaggcgctg
gccggcggcgtctccggctccggccggaaggccgtcacggcgttgaagctcactaaggcc
ctgttgcgcaccgtgtggtggcacgtcgcggtgaccgcgttctacgcgctggtctacaac
gtctccacctacgtcggcccgtacctcatcgactccctggtgcagtacctcaacggcgac
gagaggtacgcgagcaaggggcagctccttgtcctcgcgttcattgtcgccaaggtattc
gagtgcctgtcgcagcgccactggttcttccggctgcagcaggcggggatacgcgcgcgt
tccacgcttgttgccgtcgtgtaccagaagggcctcgcgctgtcaagtcagtccaggcag
agccgcacgagcggcgagatgatcaacatcatcagcgtcgacgccgaccgcgtcgggatc
ttctcatggtacatgcacgacctctggctggtaccgttgcaagtcggcatggcgctgttc
attctgtactccaccctcgggctcgcttccctcgccgcacttggcgccaccgtggtcgtc
atgcttgccaatgtgcctcctgggcaaatgcaggagaagttccagcagaagctcatggac
tgcaaggatgtcaggatgaaggcaacgtccgagatcctgcgcaacatgcggattctgaag
ctgcaggggtgggagatgaagttcttgtccaagatcattgagctgaggaagacagagaca
aattggctgaagaaatacctctacacaacgactttggttacctttgtgttctggggggcc
ccgactttcgttgctgtggtgacctttggggcgtgcatgctcatggggattccattggag
tcagggaaagtgctttctgctttggccacgttccgcgtgctgcaggagccaatatacaac
cttcctgacacgatttcgatggtgatccagaccaaggtgtctcttgacaggatagcatcc
ttcctatgtcttgaggaattgccgactgattctgtacagaggctgccaaatggtagttca
gatgttgcaattgaggtcaccaacgggtgcttctcctgggatgcctcaccggaattgcca
acgctgaaggacctgaacttccaagctcagcgaggcatgcgtgttgcagtttgtgggaca
gtgggctctggtaaatcgagcttgctatcttgcattcttggtgagatcccaaagttatca
ggagaggttaagatttgcgggatgacggcttatgtcagccagtcagcatggatacagagt
ggcaaaattcaggagaacatattgtttggcaaggagatggacaaggacaaatatgaaaga
gtccttgagtcgtgttcactgaagaaagacttagagatattgccattcggtgaccaaact
gtcattggagagcgagggatcaacctgagtggtggacagaaacaaaggattcagatagcc
cgtgctttgtatcaggaagcagacatctatttgttcgatgacccattcagtgctgttgat
gctcatacaggatcccaccttttcaaggaatgcttgctcggggctttgtcttcaaaaaca
gtagtttatgttactcatcagattgaattcctaccagcagctgaccttattttggtgatg
aaagatggcaaaatagcacaagcaggaaaatacaatgaaatacttggttcaggagaagag
ttcatggagctagttggtgcacacagggatgcactcgcagaattggacacaatcgatgct
gcaaacagaagcagcgagggatccccttccagtggcacagcaaaattgatcagatctcta
tcatcagctgagaagaaagataaacaggacgaagggaacaatcagagtggacagctggtg
caggaagaagaaagagagaaaggcagggttgggttttgggtctactggaagtatctcacc
ttagcttataagggtgcacttgtaccgttagtgttgcttgcacagctacttttccaagtc
ctacaaattgggagcaattactggatggcttgggctgctcccgtttcaaaggacgttgag
cctccagtgagcatgtcaacactgatatatgtctatattgcattggctgttggaagctcg
ttctgcgtcctcctaagagcgttgtttcttgtaacagcctcatacaagacagcgactcta
ttattcgacaagatgcacatgtccatatttagagctcctatgtctttctttgattccact
ccgagtgggcgcatcttgaacagagcttccactgatcaaagcgaagtggacaccaacatt
gcaccccagatgggctctgttgcatttgctgtcatacaacttgttggaatcattgcagtg
atgtctcaggttgcatggcaggtgtttgttgttttcattcctgtagttgctacctgtttc
tggtatcagcgatactacattgatacagccagggagctgcaaaggctagtaggtgtttgc
aaagctccaatcatacagcattttgcagaatcaataacaggatcaactaccatcagaagt
tttggcaaggaaaatcagtttgtatcagcaaatagccatctaatggatgcctactccaga
ccgaagttctacaatgctggagcgatggaatggctttgctttcgcctggatgtgctgtca
tctcttacatttgcattctctttgatattcttgatcaatctgcccccgggtttcatcgat
ccagggattgctggtcttgcagtcacatatgggcttaacctgaacatgctgcaagcatgg
gttgtctggagcatgtgcaatttggagaacaagattatatcagtagagagaatcctgcaa
tatataagcattcctgcagagccccctctttccatgtcagaagataagctagctctggct
cataactggccatccgaaggagaaattcaactccacgatctccatgtgaaatacgccccg
cagctgccatttgttctgaagggacttacagtcaccttccctggaggcctgaagactggt
attgttggaagaacaggaagcggaaaatcaacccttatacaggctcttttccgtatcgtg
gacccaactattggccaaatactaatagatggcgtcgacatttgcaccattggtctgcac
gatctgaggtctagactgagcatcattccacaagagccaaccatgttcgagggtaccgta
agaagtaaccttgaccctcttggggagtacacagacagtcaaatctgggaggccttggat
tgctgccagttaggtgacgaggtcaggaggaaggagcacaagcttgactcaccagtgata
gagaacggcgagaactggagcgtgggtcagcgtcagcttgtatgcctaggtagggtaatc
ctgaagcggagcaagatcctcgtcctggacgaagccaccgcttcagtagacaccgcgaca
gacaacctgatccagaagactcttcggcagcaattctcggaggcgacggtcatcacaatc
gcccacaggatcacgtcggtcctcgacagcgacatggtcctcctccttgacaacggtgtg
gccgtggagcgcgacacgccggccaagctgctggaggacaagtcgtcgctcttctccaag
ctcgtcgcggaatacacgatgaggtcgacgcacacgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (50)   

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