KEGG   Sorghum bicolor (sorghum): 8079040
Entry
8079040           CDS       T01086                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    8079040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbi04121]
    8079040
Enzymes [BR:sbi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     8079040
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    8079040
SSDB
Motif
Pfam: Sina_ZnF Sina_RING
Other DBs
NCBI-GeneID: 8079040
NCBI-ProteinID: XP_021313458
Position
3:8050693..8059667
AA seq 293 aa
MGGKRPRQQVPLSRAPTKGPRLQDETLAEMSQHQAEEKITVTINANLLKCCVCFGPLTSP
IFQCTKGHVSCSGCCTERYEDDEVECLMCREPETATRCLAMEHFLGGIHVPCPFQQHGCT
EMIPYASEQAHKASCAHAPRHCPISGCAGYAGKPLREHIRQDHPGVVRTVVSPCCLRPLR
MRAHEQARVVRLCNGTGNGDDGGGGGAEFLVVVGQYKQLGRALSVVHLVDESVDEQDFKH
RIDVVSKAGVLSLSGETLDAEHLAEPYEASLFLFVPNETWDSPEGIRVFIELE
NT seq 882 nt   +upstreamnt  +downstreamnt
atgggtgggaagaggccaaggcaacaggtgcccctatcacgcgccccgacaaaaggccct
aggctgcaggatgagaccctagccgagatgagccaacaccaagcggaggagaagatcacc
gtcaccatcaacgccaacctattgaagtgttgtgtatgctttggtccattgacgtcaccc
attttccagtgcaccaaaggccatgtctcttgctcagggtgctgcaccgagaggtacgag
gacgacgaggtcgaatgcctcatgtgccgtgagccagagacggctacccgctgcctcgcc
atggagcacttcttgggcggcatccacgtgccatgcccgttccagcagcatgggtgcacc
gagatgatcccctacgcgtcggagcaagcccacaaggcgtcgtgcgcccacgccccgcgc
cactgccccatctccggctgcgcgggctacgccggcaagcccctccgcgagcacatccgg
caagaccaccccggcgtggtccgcacggtcgtctcgccgtgctgcctcaggccactgagg
atgcgcgcgcacgagcaggcccgcgtggtgaggctctgcaacggcaccggcaacggggac
gacggcggcggcggcggcgcggagttcctagttgtcgtcggacaatacaagcagctgggg
cgcgcgctgtcggtggtgcacctcgtggatgagtccgtggacgagcaggatttcaagcac
aggatcgatgtggtcagcaaggccggcgtcctctcgctgtccggtgagaccctggacgcc
gagcacctggcggagccgtacgaagcgagcctgttcctgttcgtccccaatgagacctgg
gactctcctgagggcatccgtgtgttcatcgaactggaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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