KEGG   Sorghum bicolor (sorghum): 8080576
Entry
8080576           CDS       T01086                                 
Name
(RefSeq) protein PIR
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8080576
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     8080576
   Factors involved in mRNA localization
    Other mRNA localization factors
     8080576
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd WASH-4_N
Other DBs
NCBI-GeneID: 8080576
NCBI-ProteinID: XP_021321445
Position
1:complement(77490587..77511122)
AA seq 1285 aa
MAIPVEEAIAALSTFSLEDEQPDVQGLAVLLSSERYATNSPIEYSDVAAYRLSLGEDTKA
INQLNTLIQEGKEMASLLYTYRSCVKALPQLPDSMKHNQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERLVNGPTITHFWSMLKLLDVLLQLDHLKNAKASIPNDF
SWYKRTFTQVSTQWQDTDTMREELDDLQIFLSTRWAILLNLHAEMFRTNTVEDILQVLIV
FCVESLELDFALLFPERHTLLRVLPVLVVLATSSEKESESLYKRVKINRLLNVFKNDPVI
PAFPDLHLSPAAILKELSSYFQNFSSQTRLLNLQAPHEIQGRELQDYQRHYLILNHMGTI
RAEHDDFSIRFASAMDQMIRLKSSDGVDNDWSRDIKGNMYDIVVEGFQLLSRWTGRIWEQ
CAWKFSRPISDSQQNSTTCFDYEKVVRYNYTAEERRALLELIGYIKSIGLMMQHCDTLVS
EALWETIHMEVQDFVQDKLDTMLRTTFRKKKDLSRILSDMRTLSADWMANTSKADPEQHS
LHQETEEMRQNTFYPRPVAPTAAQIHCLQFLICELVSGGNLRKPGGLFGNSGSGIPVEDL
KQLETFFYKLSFFLHILDYTATIGTLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVDH
VIESQDAGLLESILIPFDLYNDSAQHALTSLKQRFLYDEIEAEVDLCFDLLAQKLNEIIF
TYYKSCAASTLLDSSFTYACDDGEKYFVKPLRFDAIFKLRRVMVLGRTIDLRSIITQRMN
KIFRENIDFLLERFENGDLCGVVELQQLLDILELTHQSVSRFLELDSYSLMLSEMQENLS
LVSYSSRISSQIWSEMQTDFLPNFILCNTTQRFVRSIKGTHHSSHRSSASTGKPYFYCGS
HDLTMAYQGLAGLYRDFFGVPHMFAVVKLLGSRSLPAIIRALLDHISSKITGLVPKINAL
QEALPKSIGLLSFDGGIAGCQKIVHEILTWEAKSEVKTEVLHDLKEIGSALYWMSILDIV
LRQIDTTQFMQSAPWLGLVPGNDGQVKHAYSDNTPFTTLLSAATNAVTSSPACPNPSMFL
VMSKQAEAASLLYKSNLNSGSVLEYALAFTSAALDRHYSKWSATPKTGFIDITTSKDFYR
IFSGLQYSYLEDSINNPSKKQEMLGDSVAWAGCTIMYLLGQQQHFELFDFSYQFLNVAEV
ESATVSHYQSSERTKSSNFLQGYEGILEAMRKARRLNNHVFSMLRARCPLEDKVACAIKP
SGAPLHRMKFMNTVSAFETLPQRAT
NT seq 3858 nt   +upstreamnt  +downstreamnt
atggccatccccgtcgaggaggccatcgccgccctttccaccttctcgctcgaggatgaa
caaccagatgtgcaggggttagctgtgctcctgtctagtgaaagatatgcaactaacagt
cctattgagtacagcgatgttgctgcttatcgtctatcgctaggagaagatacaaaagca
atcaaccagctgaatacgctgatccaagaaggaaaagaaatggcatctttgctgtacaca
taccgtagctgtgtaaaagctctacctcagctgcctgattcaatgaagcataaccaagcg
gacttgtatctggaaacctatcaagttcttgacttggaaatgagtcgtttacgtgaaatt
cagagatggcaagcttctgctgcttctaagttggcggctgacatgcagagattctctagg
ccagagagactggttaatggacccacaatcactcatttttggtctatgctgaagttgctt
gacgtcctactgcagcttgatcatctcaagaacgcaaaagcaagtatacctaatgatttt
tcatggtacaagagaacgttcactcaagtaagcacccagtggcaggataccgacaccatg
agagaagagctggatgatcttcagatttttctgagcaccagatgggccatcttgttaaat
ttgcatgctgagatgtttcggacaaataccgttgaggatattctacaggttcttatagta
ttttgcgtggagtcattggaattggattttgctcttctttttcctgagcgccatacccta
cttcgtgtcctcccagttttggttgtcctagcaacctcatcagagaaggagagtgagtca
ctttataagagggtgaagataaatcgtcttctcaatgtttttaagaatgacccagtgatc
ccagcatttccagatctgcatctctctcctgctgcaattttgaaggaattgtcatcatac
tttcaaaacttttccagtcaaactcgtctccttaatcttcaagcacctcatgaaattcag
ggtcgagagctacaagattatcagaggcattacttgattttgaatcacatgggaactatc
agagctgagcatgacgacttctccatacgttttgcatctgctatggatcagatgataaga
ttgaagtcatcagatggtgtggataatgactggtcccgagatatcaaagggaacatgtat
gatattgttgttgaaggcttccagcttcttagtcgatggactggcaggatttgggaacaa
tgtgcctggaaattctctcgccctatttcagattcgcaacaaaactccacgacatgtttt
gactatgaaaaggtagtacgctataactatactgctgaagaacgaagggctttgcttgaa
ttaattggttacataaagagtattggattgatgatgcaacattgtgacactttagtgtct
gaagctttgtgggaaacaatacacatggaggtccaagattttgtacaggataaacttgat
actatgcttcgtacaacatttagaaagaagaaggacctttctcggattctctctgatatg
cgaaccctctcagcagattggatggccaacactagtaaggcagacccagagcagcactca
ctacaccaagaaactgaggaaatgagacaaaacacattttacccaagaccagttgcacca
acagctgcacagattcattgtttgcaatttcttatatgtgagcttgtatctggtggtaat
ctgagaaaacctggaggactatttgggaatagtggctctggcatacctgtggaagatctt
aaacaactagagacatttttctacaagcttagttttttcttgcatattttggattataca
gcgactattggtactctaactgatcttgggtttctttggttcagagaattttaccttgaa
tcttctcgtgtcattcagtttccaattgaatgctcgctcccgtggatgctggtggaccat
gtcattgaatcacaagatgctggtcttctcgaaagcattttgattccatttgacctttac
aatgactctgctcaacatgcactaacttctctcaagcagagatttctttatgatgaaatt
gaagctgaggttgatctttgcttcgatcttcttgctcagaagcttaatgagatcatcttt
acatattacaagagctgtgcagcaagtactcttctcgatagttcatttacatatgcatgc
gatgatggtgagaagtactttgtcaaacctttgcgatttgacgcgattttcaagttaagg
agagtaatggttttagggaggacaattgacctaagaagcataattactcagagaatgaac
aaaatattcagggaaaatattgactttctacttgagcgctttgaaaatggagatctatgt
ggtgttgtggaactgcaacaactattggatattttggagcttacacaccaatcagtatca
agatttcttgaattggattcttactctcttatgcttagcgagatgcaagagaatctttcg
ttggtttcttattcaagtcgcatctcttctcagatatggagtgagatgcagacagatttc
ttgccaaatttcatcctatgtaataccacacagcggtttgtccgatccataaaaggaact
caccactcttcgcatagatcaagtgcttctactgggaagccctacttttattgtggatca
cacgatttgaccatggcataccagggtcttgctgggctgtaccgtgacttttttggagtc
cctcatatgtttgcagttgttaaacttcttggttccagatcattgcctgcaatcatccgt
gctttactggatcatatatcaagtaagattacaggtttggtaccgaaaataaatgcactg
caagaagcattaccaaaatctattgggcttctttcatttgatggtggtatagcaggttgt
cagaagatagttcatgaaatattgacgtgggaagcgaaatcagaagttaaaactgaagtt
cttcatgaccttaaggaaattggaagtgctttgtattggatgagcattctggacattgtt
ttgagacaaatcgacactacacagttcatgcagtcagctccgtggcttggactggttcca
ggaaatgatgggcaagtgaagcatgcctactctgataatactccatttaccacactttta
agtgctgccaccaatgctgtgacatcaagccctgcgtgcccaaatccatctatgtttctt
gtcatgtcaaagcaagctgaagctgccagtctgctgtacaaatcaaacctcaactctggt
agtgtgctggagtatgctcttgcattcacaagtgctgccctggatagacactacagcaaa
tggagcgcaactccaaaaacagggtttatcgacattactacttcaaaggacttctatcgc
atttttagcggtcttcagtatagttacttagaggatagcattaacaatccttcaaagaaa
caggaaatgctgggtgattctgtagcatgggctggctgtacgatcatgtacttactggga
cagcagcagcacttcgagctttttgatttctcctatcaatttctcaacgtggcagaagta
gaaagtgcaacagtttcacactatcaatcttcagagaggactaaaagttcaaatttcttg
caaggctacgagggcatccttgaagcgatgaggaaggctaggaggctcaataaccatgtt
ttctcgatgttgagggcacgatgtccccttgaggacaaggttgcatgtgcgatcaagcca
agtggggcaccgcttcaccggatgaagtttatgaacaccgtttctgcatttgagacattg
ccacaaagagccacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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