KEGG   Sorghum bicolor (sorghum): 8082290
Entry
8082290           CDS       T01086                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbi04131]
    8082290
   04121 Ubiquitin system [BR:sbi04121]
    8082290
Enzymes [BR:sbi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     8082290
Membrane trafficking [BR:sbi04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    8082290
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    8082290
SSDB
Motif
Pfam: zf-RING_2 zinc_ribbon_9 zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-rbx1 zf-RING_UBOX zf-C3HC4_3 zf-ANAPC11 Rad50_zn_hook zf-RING_5 zinc-ribbons_6 zf-Nse DZR zf-C2HE zf-RING_16 HypA DZR_2
Other DBs
NCBI-GeneID: 8082290
NCBI-ProteinID: XP_002465271
UniProt: A0A921V047 C5WZS7
Position
1:65960385..65962613
AA seq 285 aa
MSVGRQSYWCYQCRQRVRPRGREMVCPYCDSGFVAEMDDVDALMSHFVGMDPDFHRDPRF
GIMEAISAVMRHGMSGMNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLTEDNGFD
VFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQNDRRGPPPAAQSSIDAMPTVKITQRH
LSGDSHCPVCKEKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPTQGSTTGA
SCSHTRSTNQSQSSSSSSSSGRTSGRQRRRNPFSFLWPFRSSSSR
NT seq 858 nt   +upstreamnt  +downstreamnt
atgtcagttggcaggcaatcatactggtgttaccaatgccgacagagggtgaggcctcgt
ggccgggagatggtgtgcccctactgtgattctgggtttgtggccgaaatggatgatgta
gatgctctcatgagccacttcgttgggatggatcctgacttccaccgtgacccaaggttc
gggatcatggaggcgatctccgccgtgatgcggcatggtatgtcagggatgaacagggag
gttgatgtcagaggaaggccaaacatcttttcagacctggagatggagtttggttcaggg
ccatggctgctcttccgtggtcagctccctggtcatctcacggaggacaacggattcgat
gttttcatcaatggacgacgcggtgttggcatgaggagggccaacattgcagactacttt
gttgggcctggattggatgatcttatcgagcaattgactcagaatgatcgtcgaggacca
ccacctgctgcgcagtcctcaatcgatgctatgcccacagttaagatcactcagaggcat
ctcagtggggactcacactgccctgtctgcaaggagaagttcgagttgggatccgaagca
agagagatgccatgcaagcatttataccactccgattgcatagttccttggttagagcag
cataattcctgtcccgtttgccgttatgagctcccaacacagggttctactacgggagct
agctgctcgcacacaagatcaaccaaccaaagccagagctcaagtagttcaagcagcagc
gggagaaccagtgggcgtcaaaggagaaggaacccgttctcgttcctgtggcctttccgc
tcatcaagttctcgctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (32)   

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