KEGG   Sorghum bicolor (sorghum): 8082689
Entry
8082689           CDS       T01086                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3 isoform X1
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    8082689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbi03032]
    8082689
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8082689
Enzymes [BR:sbi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     8082689
DNA replication proteins [BR:sbi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    8082689
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     8082689
    Bloom's syndrome complex (BTR)
     8082689
   FA (Fanconi anemia) pathway
     8082689
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII
Other DBs
NCBI-GeneID: 8082689
NCBI-ProteinID: XP_021314891
Position
4:complement(65450686..65455899)
AA seq 779 aa
MKGVLQIKGASGREKKAPKELESVLNQYFGYSGFRGKQLEAIEAVLSGRDCFCLMPTGGG
KSMCYQVPALVKTGIVLVISPLIALMENQVASLKNKGIPAEFLSSTQASHTKQRIHEDLD
TGNPSLKLLYVTPELVATSGFMAKLKKLYNRGLLGLVAIDEAHCISTWGHDFRPSYRKLS
SLRKQFPDIPLLALTATAVPKVQKDVISSLCLQNPVILRASFNRPNIFYEVRYKDLLDDV
YSDISNLLKSSGNACSIIYCLERAACDDLSMHLSQQGVSSAAYHAGLNSKVRSSVLDDWL
SSRTQVVVATVAFGMGIDRQDVRIVCHFNLPKSMESFYQESGRAGRDQRPSRSVLYYGLD
DRRRMEFILRNPKINKAQPSSSSNELSEKALADFSQVLTVKHIHWSTRPCSLFKSIMLPH
LMQIVDYCESSSCRRKKIIESFGEKVQPTLCQRSCDACKHPNLVSSRLEELRRVPNCRFN
KISPVFQSSVKPAHLDTEFWNREDEASISAEDISDSDDGNEVVSNIAISKVPAKAGLDAK
FKALERAENAYYQGKGQTKQQGGGLADKKSISQTLRDACRKRLLDALGQAKLRLGNIPCD
DEASATHLETECFKKYEKVGKTFYNSQIAATVRWLSSATSSQMHDRLHAVIDQTKDDGAS
GSPDIVPESPPASPKIVGTKPGETSNYEADVKPQHICKLGKRGHSDVSTEGAAASTGNME
LPSIPTGNMVLPAIPTFREFLSQKGRDRAKSYSNSQPSGIRRKSSGQVDKEETSKRMKS
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgaaaggcgtacttcagattaagggggcatcagggcgtgaaaagaaggctcctaaggag
ctcgagagtgtcttgaaccaatatttcggatattcgggatttcgaggaaaacaactggaa
gctatagaagctgttctatcaggaagagattgcttttgtttgatgccaactggcggtgga
aagtccatgtgctatcaggttccagctctggtgaagacaggcattgttcttgtcatttca
cccttgatagcgctgatggagaaccaggttgccagcttgaaaaataaagggattccagct
gaatttctctcatcaacacaggcatctcacactaaacaaaggatacatgaagaccttgat
actggtaatccttctttaaagttgctatatgtcactcctgagcttgttgcaacatcaggc
tttatggcaaagctaaagaagctctacaacagaggtcttcttggtcttgttgctattgat
gaggctcactgtatttcgacttggggccatgatttcagacctagctatcgcaagctttca
tcattgaggaagcagttcccagatatccctttgttagctttaactgcaactgctgtcccg
aaggtccagaaagatgtgatatcatcactgtgcctgcaaaatccagtgattcttagagct
tcatttaatcgacccaatatattctatgaagttcgttacaaggatcttcttgatgatgtt
tactctgatatatcaaatttactgaagtcaagcggaaatgcttgctcaattatatattgt
cttgaacgggcagcttgtgatgatctaagcatgcatttgtcacagcagggtgtctcttct
gctgcttatcatgctggcctaaatagcaaagtgcgaagttctgttctcgatgactggctt
tcgtcgagaactcaagttgttgttgcaactgtagcctttggaatgggtattgatagacaa
gatgtccgtattgtatgccacttcaacttgcctaagtcaatggaatccttctatcaggag
tcaggtcgagctggtcgtgatcaacgaccttcaagaagtgttttgtattacggattagat
gaccggaggagaatggaattcattttgagaaaccccaaaattaacaaagcacaaccgtct
tcctcttcaaatgagctttctgagaaggctctagctgacttcagtcaggttcttactgtc
aaacatatacattggtctactaggccatgcagtttattcaagtctattatgttgcctcac
ttgatgcagattgttgactactgtgaaagttctagctgccggcgaaaaaagatcattgag
agctttggagagaaagtacaaccaactttatgccaacgctcatgtgatgcttgcaagcac
ccaaatttagtgtcgtcacgtctggaggaactccgtcgtgtgcccaactgtcgctttaat
aagatctccccagtgtttcaaagctcagttaaaccagcacacttggacacagaattctgg
aatcgtgaagatgaggcaagcatatcggctgaagacatctcagattctgatgatgggaat
gaggtggtgagtaatatagccatttcaaaggttccagcaaaagctggtctggatgcaaaa
tttaaagctctggagcgtgctgaaaatgcttattaccaaggaaaaggtcagaccaagcag
cagggtggtggccttgctgacaagaaaagcatctctcagacgctaagagatgcatgccgg
aaaagattgttggatgctcttggacaagcaaagctgcgacttgggaatattccgtgcgac
gacgaggcttctgctacacaccttgaaacagagtgcttcaaaaaatatgagaaagtgggc
aagacgttctacaactcacagatagccgccacagttcggtggctgtcatccgcaacatcc
agtcagatgcacgaccgcctccatgctgttatcgaccaaactaaagatgatggtgcatca
ggctcccccgacattgttccagagtcacctccagcatctcctaaaatcgtcggcacaaag
ccaggagaaaccagtaactatgaagctgacgtcaaaccacagcatatttgtaagttgggg
aaaaggggacattcagatgtgtctacagagggtgctgcggcatcgactgggaacatggag
ctcccctcaataccaactgggaacatggtgctccccgcgataccaacgttcagagaattc
ttgagccaaaaaggaagggatcgggcaaagagctattcaaattcccagccatctggtatt
cgtaggaagtctagtggtcaggttgataaggaagaaaccagcaagaggatgaaatcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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