KEGG   Sorghum bicolor (sorghum): 8083251
Entry
8083251           CDS       T01086                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein At5g25630
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sbi03016]
    8083251
   03029 Mitochondrial biogenesis [BR:sbi03029]
    8083251
Transfer RNA biogenesis [BR:sbi03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    8083251
Mitochondrial biogenesis [BR:sbi03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    8083251
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR_3 PPR PPR_long
Other DBs
NCBI-GeneID: 8083251
NCBI-ProteinID: XP_002462511
UniProt: A0A921UUR9 C5X2Z9
Position
2:complement(62277370..62280668)
AA seq 643 aa
MVIMVENGVQLTLTSTLKSTGKTRISADGLNNGNGSQTTKEKHEYNGTLQPSKGQKPQLC
TTCAKGHTCQSVINRTRQMRALIDSNKPYQAHSVFKHLMEEGHKPSLVTYTILLTALTNQ
RMFESIPSLLAQVELAGIRPDSIFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTF
NTLIKGYGIVGKPEESQRVFDMMGIEGSIKPNLTTYNILVKAWCDRRNLEEAWGVVGKMR
AGGVEPDIVTYNTIASAYANNDETWRAEELIVEIQTRVRTSERTWGIIIGGYCRESRLEE
ALRCVQQMKDAGIVPNVVIFNTLLKGFLDVNDMAAVNNILGLMEQFGIKPDIVTYSHQLN
TFSSLGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGFVRAKQPEKAEDLLLQMSHLGVCP
NVVTFTTVISGWCSVADMESAMRVYEKMCKSGVYPNLRTFETLIWGYSEQKQPWKAEEVL
QMMRETGVKPKESTHRLIADAWKAVGLIENINNSNGSPNGPYAIDKLDDSDDNCNVQISE
DDNKLQSFDESKGRAMNGRSRSSFLQITNALGCGGIVSAKVLKVGEFPSERLKAIKNTSF
LQRSQRFQLLHLEFCRKQLKNGGFYSQSISSFKMVFSSRGYIY
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggtcataatggtagagaacggagttcagctgacactgacctccactttgaagagcaca
ggcaagacaaggatcagtgcagacgggctgaataatggaaatggatcacaaactaccaag
gagaagcatgaatataatggcactttacaaccatcaaaaggccagaagccgcagctgtgc
acaacatgtgcaaaagggcatacttgtcaatcggtcattaaccggacaagacaaatgcga
gctctaatcgactcaaacaagccctaccaagcacactctgtattcaagcacttaatggaa
gagggacacaaaccttcattggtcacatatacaattctactgaccgccctgacaaaccag
aggatgtttgagtcgatcccatcactgcttgctcaagttgaactagctggaattaggcca
gactctatcttcttcaatgccttgataaatgcgtttgttgaggcgaagcggatgggtgaa
gcaataaacacattctggaaaatgaagcattctggctgccacccaactacaagcaccttc
aacacactgataaaaggatatggcattgtaggcaaacccgaagaatcacagcgtgtcttc
gacatgatgggcattgaaggatcaatcaagcctaacctcacaacatacaacattcttgtg
aaggcatggtgtgatcggagaaatcttgaggaggcctggggcgttgtgggcaagatgcga
gcaggtggtgttgagcctgatatcgtcacttacaataccatagccagtgcatatgccaat
aatgacgagacatggagagcagaagagctcattgtggagattcagactagagtacgcacc
agcgagcgaacatggggcataattataggtggttattgcagggagagcaggttggaggaa
gcattacgatgcgtccagcaaatgaaggatgcaggaattgttcctaacgtcgtaatcttc
aacacactgctgaagggcttccttgatgtaaatgacatggctgcagtcaataatatcctg
ggtctgatggagcagtttggcatcaagcctgacattgtcacctacagtcaccagttgaac
acattcagctcgttaggccacatggctaaatgcatgaaggtgtttgataaaatgatcgag
gcaggaatcgagccagatcctcaggtatacagcattcttgccaaaggatttgtccgtgct
aagcagcccgagaaagcagaagatcttctgttgcaaatgagccatcttggtgtttgccca
aatgttgtcaccttcaccactgtcattagcggttggtgcagcgtggccgacatggagagt
gccatgagagtctatgagaagatgtgcaagtcaggcgtctatcccaatctcaggacattt
gaaactctgatctggggctacagtgaacagaagcagccttggaaagctgaggaagtcctt
cagatgatgcgggagactggtgtcaagccgaaggaaagcacccaccgtctcattgctgat
gcatggaaagctgttggtttgatcgagaacatcaacaactcaaatggttccccgaatggt
ccttatgcaattgacaaattggatgattcagatgacaattgcaacgtgcaaatatcagaa
gacgataacaagctgcaaagttttgatgaaagtaaaggacgtgcaatgaatggtcggtca
cgttccagttttcttcagataacaaatgcattaggctgcggtggtatagtttctgccaag
gtcctgaaggttggagaatttccatccgaaagactgaaggctatcaaaaacacgtccttt
ctacaaagatcacaacgatttcaattattgcatctcgagttttgtaggaagcagcttaag
aatggtggattctatagtcagagcatcagctcattcaaaatggttttctctagtagagga
tatatttattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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