KEGG   Sorghum bicolor (sorghum): 8085827
Entry
8085827           CDS       T01086                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein At5g57250, mitochondrial
  KO
K17964  leucine-rich PPR motif-containing protein, mitochondrial
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:sbi03029]
    8085827
Mitochondrial biogenesis [BR:sbi03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    8085827
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR PPR_3 PPR_long MRP-S27
Other DBs
NCBI-GeneID: 8085827
NCBI-ProteinID: XP_002457610
UniProt: C5XGH4
Position
3:complement(11041468..11055853)
AA seq 1089 aa
MPFPGGNGEPPPLTPPFPSLIKLGRAVTACHVDRLLTVLLRRRRHRLLAALASQALANAI
APTPRTHLLAASALLDSARPRDAAQRLALASRTASRRLWDALLRRACARGCDPRHALELL
SAAIEDHGMVLSPSTYRVMVVLLCAHGEVDCALRVFEVMTRRGCQVEDRVCSSIISGFSR
TGKAGAGLDFYEKVKRQFSGFDPGLVTLTSVVHALGLEGRTGEVAELMQEMECKGMNADA
VFYGSMVHGYMSRGFLMEGLREHRSMLEKGITADAINYTTVIDGLCREGSVEKVMGFLDE
MEQVDAKPNLITYTSLVGGFCKRDRLEDAFSIVRKLEQTGVVVDEYVYSILIDSLCKMED
LDRAFSLLTEMENKGIKASIITYNAIINGLCKAGHTEKALEISEGVAADNFTYSTLLHGY
INRGDITGVMAIKDRLEGSGISIDVVTCNVLIKASFMINKVNDAWSLFHKMPEMGLRPNT
ITYHTIIDKLCKAEEVDKALELFDEYKKDSGFSTAVVHECLIKALCYGGKVDMADQIFYD
LVQKKIRLNFFNCRKLIHAHFKRHGEHGVLDFVCKVGELDIDLFSAVCNYASAFLSNRNC
WQAAMDAYKLLRMQAIAGTSKTCYKLLKSLHRNGSEEVIQPLLCDFIKIHGLLDPTMINM
MSCYLSKKCVSKAIWFSNYMGKGSVPVSVLRGAVFALKKQGEVLDACNFLKIAEQSGLVD
LAMYSIVVDGLCKGGYLEKALDLCESMKKEGFHPNIIIHNSVLSGLCHQGCLTEAFRLFD
YLENSNMLPTIITYTILIGALCREGLLDDADQLFQKMSTKGIKPTTRVYNLLISGYCNFG
LTEKALELMSHLEELFLLPDCFTLGAIINGLCLKGETEAALSFFNEYRHRDMEPDFVGFM
SLVKGLYAKGRMEESRGILREMFKCKEVVELINSVGDKIEAEPLVDLLSSACDQGRIDEI
VTILNEVGLMLLSSSSSVSYNALAHLNKVQKAEDAYDSMKNSGQASPVAYDISSNSLLGS
SDGIVQPMIDGDDILSNLSGDTDIDYQNLLGKSPNDDFESYYAAIASLCSKGEVLKANKA
VEAMIQNCG
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgcccttccccggcggcaacggcgagccccctccccttacaccgccgttcccctcactc
atcaaactcggccgcgcggtcaccgcgtgccacgtcgaccgcctcctgacagtactcctt
cgccgccgcaggcaccgcctcctcgccgcgctcgcctcccaggcgcttgccaacgccatc
gcccctacaccgcgcacgcacctccttgccgcctccgccctgctcgactccgcgcggccg
cgtgacgccgcacagcgcctcgcgcttgcctcccgcaccgccagtcgccgcctctgggat
gctctgctccgccgggcctgtgctaggggctgcgacccgcgccacgcactggagctactc
tccgctgccatcgaagaccacggcatggtgctgtctccgtccacgtaccgcgtgatggtg
gtgttgctgtgtgcccacggggaggtggattgcgcgctcagggtgttcgaggtaatgacc
aggagggggtgccaggtagaggatcgcgtttgcagctcgatcatttctgggttctccaga
accgggaaggctggagcagggctggatttctacgagaaggtgaagcgtcagttcagtgga
tttgatccaggccttgtgacactgacatcagttgtccatgctcttgggttggaggggaga
actggtgaggtggcagagcttatgcaggagatggagtgtaaaggcatgaatgctgatgct
gtgttttacggcagcatggttcatggatatatgagtcgtgggttcttgatggaaggtctt
cgggagcatcgatccatgctagagaagggaatcacagccgacgcgattaactatactact
gttattgatggactctgcagagaaggtagtgtggagaaagtaatggggttcttggatgag
atggagcaagtggatgctaaaccaaatttgattacttatacatcactggttggtggcttc
tgtaagagagacaggttggaagatgctttctctatcgtgaggaaactggaacaaactggc
gtggtggtggatgagtatgtatattcgattttgattgacagtttgtgcaaaatggaagat
ttagacagggctttctcattgctcacggagatggagaataagggaataaaagctagcatc
ataacatacaacgcgataataaatggtttgtgtaaagctggtcacactgaaaaggctctt
gaaatttctgaaggtgttgctgctgataatttcacatatagcacactgttacatggttac
attaacagaggtgacataaccggtgttatggcaataaaggataggcttgaaggtagtggt
atttctattgatgttgtcacatgcaatgttcttatcaaagcatcgtttatgattaacaag
gtgaatgatgcctggagcttgtttcataaaatgcctgagatgggcttaagacctaatact
atcacttaccatacaataatagacaaactgtgtaaagctgaggaagttgacaaggctctg
gagttgtttgatgaatacaagaaagattcaggattctccactgcagttgttcatgagtgc
ctgattaaagcactgtgttatggaggaaaagttgacatggctgaccaaatattttatgat
cttgttcagaaaaaaataaggctcaatttctttaactgcaggaagttgattcatgcacac
ttcaaaagacacggtgaacatggtgtgctggatttcgtttgtaaggttggtgaattagat
attgacttattttcagctgtttgcaattatgcttctgctttcttaagcaacagaaattgc
tggcaagcagcaatggatgcttacaagttactcagaatgcaagccattgctggaactagt
aaaacatgctacaagctgctaaagagcttacaccgaaatggaagtgaagaggtcatacag
ccattgctatgtgatttcattaaaattcatggcctgcttgatccaacaatgataaatatg
atgtcttgttatctcagcaaaaaatgtgttagcaaagctatttggttttctaattacatg
ggcaaaggcagtgttcctgtcagtgttctgagaggagctgtctttgctctaaagaagcaa
ggtgaagttctggatgcatgtaactttttgaagatagctgaacaaagtggcttagtagat
ctagccatgtactccatagtggtggatggcctttgtaagggtgggtatcttgaaaaagca
ctagacctttgtgaaagcatgaaaaaagagggatttcatccgaacattatcattcataac
tcagttctcagtggtttgtgtcatcaaggatgccttactgaagctttcaggctctttgac
tacttagaaaacagcaatatgcttccaacaataatcacctataccattcttataggtgct
ttgtgcagagaaggtttgttagatgacgcagatcagttattccaaaaaatgtcaaccaag
ggtatcaaacccactacccgtgtttacaacttgctgataagtggttattgtaactttgga
ttaactgaaaaggcccttgagcttatgtctcatttggaggaactctttctactgccagat
tgtttcacacttggtgcaattatcaatggactctgtctgaaaggtgagactgaagctgca
ttaagcttctttaatgaataccgtcatagggatatggaacctgattttgttggtttcatg
agccttgtcaaaggactctatgcaaaaggaaggatggaagaatccaggggcatcttgagg
gagatgtttaagtgcaaagaagtcgtcgagttaataaacagtgttggagataagattgaa
gcagagccccttgttgatctcctatcttctgcatgtgatcaagggaggattgatgagatt
gtaactatcctaaatgaagtgggactcatgcttttatcctcttcaagttcagtcagctat
aatgcgcttgcccacctcaacaaggtacagaaagctgaggatgcttatgattccatgaaa
aattcaggacaagcaagtccagtcgcttatgatatttctagcaatagtctccttgggagt
tctgatggcatagttcaacccatgatagatggagatgatattttatcaaacttgagtggt
gacactgatattgactaccaaaatttgcttggaaagtctcccaatgatgatttcgagtca
tattatgctgctattgcttcactttgctcgaaaggggaggttcttaaggccaacaaggca
gttgaagcaatgattcagaattgtggttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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