KEGG   Shewanella bicestrii: CF168_00055
Entry
CF168_00055       CDS       T05197                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
sbj  Shewanella bicestrii
Pathway
sbj03030  DNA replication
sbj03430  Mismatch repair
sbj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CF168_00055
   03430 Mismatch repair
    CF168_00055
   03440 Homologous recombination
    CF168_00055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbj03032]
    CF168_00055
   03400 DNA repair and recombination proteins [BR:sbj03400]
    CF168_00055
Enzymes [BR:sbj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CF168_00055
DNA replication proteins [BR:sbj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CF168_00055
DNA repair and recombination proteins [BR:sbj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CF168_00055
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_3 DNA_pol3_beta_2 PglD_N
Other DBs
NCBI-ProteinID: ASK67372
UniProt: A0A220UHJ7
Position
8986..10086
AA seq 366 aa
MKFSIDRDALLKPLQLVCGAVERRHNLPILANLLVEVSGHSLKMTGTDLEVELVGQAVIH
GDIEEGRTTVPAKKLLDIVKSLPEQSELKVEQQDNKWLLRSGRSRFSLATLPAEEYPNVE
AFQAEIEFTLKQGVLKSLIDATQFSMANQDVRYYLNGLLLETEGNVLRAIATDGHRLALS
HRTIDAQLPEKQVIVPRKGVMEMARLLEADDLDIAIAIGDNAIRATTSTTVFTSKLVDGR
FPDYRRVLPKGGDKIVIASRNHFKQALTRASILSNEKFRGVRIQLEAGLLKITANNPEQE
EAEEIIDVDYNNQPLEIGFNVSYLLDVLNNLKSDDVRITLIDGNSSALLENHLEEDSMYV
VMPMRL
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaaattttcaattgatagggacgccctattaaagccgcttcaattggtttgtggtgcg
gtagaaagacgccataacttgcctattttggcaaatctccttgtagaagttagtgggcac
tcactcaaaatgacaggtaccgacctcgaagttgagttagtgggccaggcggtcattcat
ggtgatatcgaagaaggtcgtacaacagttcctgctaagaaactgttagatatagttaaa
tccttacccgagcaaagtgagcttaaggtcgagcaacaagataacaaatggttgttacgc
tctggccgtagccgtttctcgctggcaaccctgcccgcagaagaataccccaacgtggaa
gcctttcaggcggaaatcgaatttacccttaagcaaggcgtgctgaagtcactgattgat
gcgactcagttttcgatggcgaaccaagatgttcgttactatctgaatggtttattgctc
gaaaccgaaggcaatgtgctgcgcgctattgctaccgacggtcaccgcttagccttaagt
cacagaactattgatgcgcaattacctgaaaagcaagtgattgtgccccgtaaaggtgtg
atggaaatggcgcgtttgttggaagccgatgatttagatatcgcaattgccattggtgat
aacgcgattcgcgcgaccaccagcaccactgtctttaccagcaaattagtcgatggtcgt
ttccccgattatcgccgtgtgttacctaagggcggtgataaaatcgttatcgccagccgt
aaccacttcaagcaagccttaacccgtgcttctattttatcgaacgagaagtttcgcggt
gtacgcattcagttagaagcgggattactgaaaatcaccgccaataacccagagcaggaa
gaagcggaagaaatcatcgatgtggattacaacaatcagccactcgaaattggtttcaac
gtcagttacttattggatgtgttaaacaaccttaagtccgatgatgtgcgtatcacctta
atcgatggtaactcgagtgccttattggaaaaccacctggaagaagattccatgtatgtg
gttatgccgatgcgcttatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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