KEGG   Shewanella bicestrii: CF168_04650
Entry
CF168_04650       CDS       T05197                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
sbj  Shewanella bicestrii
Pathway
sbj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sbj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CF168_04650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbj03400]
    CF168_04650
Enzymes [BR:sbj01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     CF168_04650
DNA repair and recombination proteins [BR:sbj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CF168_04650
 Prokaryotic type
     CF168_04650
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ASK68217
UniProt: A0A220UJ78
Position
1060483..1061142
AA seq 219 aa
MATWQAFIDHQRSQPYYQQLIAFVNQERELGKVIYPPKEDVYNAFKTTPLEQVRVVLIGQ
DPYHGPDQAHGLCFSVKRGIKPPPSLANMYKELVNDIPGFQIPNHGDLTQWAEQGILMLN
TVLTVEQGQAHSHANAGWETFTTEALKLLNAQERPIIFVLWGSHAIKKGAVITAPQHQIL
SGPHPSPLSAYRGFFGCGHFSKVNQLLMARGEAPIQWQV
NT seq 660 nt   +upstreamnt  +downstreamnt
ttggcgacttggcaggcatttattgatcatcaacgttctcaaccctattaccagcagttg
atagcatttgtgaatcaagagcgtgaattgggtaaggttatttatcctcctaaagaggat
gtgtacaacgcctttaaaacaaccccattggagcaagtgcgtgtagtgcttatcggtcaa
gatccctaccatggccccgaccaagcccacggtctgtgtttctcggttaagcgaggcatt
aaaccgccgccatcgctggccaatatgtataaagagttagtgaacgatattcccggtttc
caaatcccaaaccatggtgatttaacccaatgggcggagcaggggatcttgatgctcaat
accgtgctgacggtggagcaaggccaagcccactcccatgctaatgcaggctgggaaacc
ttcaccactgaggcgttaaagctgctaaatgcgcaggagcggccgattattttcgtactc
tggggcagccatgccatcaaaaaaggggcggtaattactgcgccacagcatcaaattttg
tcgggaccccacccgtcaccactgtcggcctatcgcggcttcttcggttgtgggcatttt
tctaaagtgaatcaactgctgatggcgcggggcgaagcgcctatccaatggcaggtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system