KEGG   Shewanella baltica OS185: Shew185_3767
Entry
Shew185_3767      CDS       T00571                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
sbm  Shewanella baltica OS185
Pathway
sbm02024  Quorum sensing
sbm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sbm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Shew185_3767
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Shew185_3767
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbm03019]
    Shew185_3767
   03036 Chromosome and associated proteins [BR:sbm03036]
    Shew185_3767
Messenger RNA biogenesis [BR:sbm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Shew185_3767
Chromosome and associated proteins [BR:sbm03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Shew185_3767
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ABS09891
UniProt: A6WSV2
Position
complement(4476123..4476395)
AA seq 90 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPARPFNVTGHQNAQGGYGAQDDAPSGE
NT seq 273 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaagacccatttttgaacgcattgcgtcgcgagcgcgtt
cctgtatcaatttacttggtgaacggcattaaactccaaggacaggtagagtcgtttgat
caatttgtcattctgttgaaaaacacagtgagccaaatggtttataaacacgctatttct
actgtcgtgccagcacgcccattcaacgtcactggtcaccaaaatgcccaaggcggatat
ggtgctcaagatgatgcgcctagtggcgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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