KEGG   Shigella boydii Sb227 (serotype 4): SBO_3059
Entry
SBO_3059          CDS       T00301                                 
Symbol
yggD
Name
(GenBank) putative transcriptional regulator
  KO
K01774  fumarate hydratase E [EC:4.2.1.2]
Organism
sbo  Shigella boydii Sb227 (serotype 4)
Pathway
sbo00020  Citrate cycle (TCA cycle)
sbo00620  Pyruvate metabolism
sbo01100  Metabolic pathways
sbo01110  Biosynthesis of secondary metabolites
sbo01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:sbo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    SBO_3059 (yggD)
   00620 Pyruvate metabolism
    SBO_3059 (yggD)
Enzymes [BR:sbo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.2  fumarate hydratase
     SBO_3059 (yggD)
SSDB
Motif
Pfam: MtlR
Other DBs
NCBI-ProteinID: ABB67565
ShiBASE_China: SBO3059
UniProt: Q31WJ3
Position
3058349..3058858
AA seq 169 aa
MAKLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVDNDEEIVEYAVKPLLAQ
SGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNEQDETPGFADDMTWDFISNVN
SITRNAMLYDALKAMKFADFAVWSEARFSGMVKTALTLAVTTILKELTP
NT seq 510 nt   +upstreamnt  +downstreamnt
atggcgaagctgacagaagatgatgtgcttgagcaactggatgcacaggacaatttattt
tcatttatgaaaactgcgcattctattttgctccaggggatacgccagtttctgccgtcg
ctgtttgtcgataacgatgaagagatcgtggaatatgcagtgaagccgttactcgcccaa
agcggcccgcttgacgatattgatgttgcgctgcgtttgatttatgcgctggggaaaatg
gataaatggctgtacgccgatatcacgcatttttcccagttctggcattacctgaacgaa
caggatgaaacgcccggatttgccgatgacatgacctgggattttatcagcaacgtcaat
agcataacccgcaatgcgatgctctatgacgcgttgaaagcgatgaagttcgccgatttc
gccgtctggtcagaggcgcgttttagcgggatggtcaaaacggcgctgacgctggcagta
acgacaatcttaaaggaattaacgccgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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