KEGG   Shigella boydii Sb227 (serotype 4): SBO_3635
Entry
SBO_3635          CDS       T00301                                 
Symbol
kdtA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
  KO
K02527  3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
Organism
sbo  Shigella boydii Sb227 (serotype 4)
Pathway
sbo00540  Lipopolysaccharide biosynthesis
sbo01100  Metabolic pathways
Module
sbo_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:sbo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    SBO_3635 (kdtA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:sbo01005]
    SBO_3635 (kdtA)
Enzymes [BR:sbo01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.12  lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
     SBO_3635 (kdtA)
    2.4.99.13  (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
     SBO_3635 (kdtA)
    2.4.99.14  (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
     SBO_3635 (kdtA)
    2.4.99.15  (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
     SBO_3635 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:sbo01005]
 Lipid A
  SBO_3635 (kdtA)
SSDB
Motif
Pfam: Glycos_transf_N Glycos_transf_1 Glyco_trans_4_4 Glyco_trans_1_4 PCC_BT
Other DBs
NCBI-ProteinID: ABB68115
ShiBASE_China: SBO3635
UniProt: Q31UZ3
Position
3654138..3655415
AA seq 425 aa
MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRHPLKPGGIMLHSVSVGE
TLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFLNK
VDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSAAGYAKLGKFVRRLLRRITLI
AAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIATST
HEGEESVVIAAHQVLLQQFPNLLLILVPRHPERFPDAINLVRQAGLSYITRSSGEVPSTS
TQVVVGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICA
RLEQASGLITVTDATTLAKEVSSLLTDADYRSFYGRHAVEVLYQNQGALQRLLQLLEPYL
PPKTH
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgctcgaattgctttacaccgcccttctctaccttattcagccgctgatctggatacgg
ctctgggtgcgcggacgtaaggctccggcctatcgaaaacgctggggtgaacgttacggt
ttttaccgccatccgctaaaaccaggcggcattatgctgcactccgtctccgtcggtgaa
actctggcggcgatcccgttggtgcgcgcgctgcgtcatcgttatcctgatttaccgatt
accgttacaaccatgacgccaaccggttcggagcgcgtacaatcggctttcgggaaggat
gttcagcacgtttatctgccgtatgacctgcccgatgcacttaatcgtttcctgaataaa
gtcgaccctaaactggtgttgattatggaaaccgaactatggcctaacctgattgcggcg
ctacataaacgtaaaattccgctggtgatcgcgaacgcgcgactctctgcccgctcggcc
gcaggttatgccaaactgggtaaattcgtccgtcgcttgctgcgtcgtattacgctgatt
gccgcccaaaatgaagaagatggtgcacgttttgtggcgctgggcgcaaaaaataaccag
gtaaccgttaccggtagcctgaaattcgatatttctgtaacgccgcagttggctgctaaa
gccgtgacgctgcgccgccagtgggcaccacaccgcccggtatggattgccaccagcact
cacgaaggtgaagagagtgtggtgatcgccgcacatcaggtattgttacagcaattcccg
aatttattgctcatcctggtaccccgtcatccagaacgcttcccggatgcgattaacctt
gtccgccaggctggactaagctatatcacacgctcttcaggggaagtcccctccaccagc
acgcaggttgtggttggcgatacgatgggcgagttgatgttactgtacggcattgccgat
ctcgcctttgttggcggttcactggttgaacgtggtgggcataatccgctggaagctgcc
gcacacgctattccggtattgatggggccgcatacttttaattttaaagacatttgcgcg
cggctggagcaggcaagcgggctgattaccgttaccgatgccactacgcttgcaaaagag
gtttcctctttactcaccgacgccgattaccgtagtttctatggccgtcatgccgttgaa
gtactgtatcaaaaccagggcgcgctacagcgcctgcttcaactgctggaaccttacctg
ccaccgaaaacgcattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (10)   
   KEGG ENZYME (4)   
   KEGG REACTION (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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