KEGG   Shewanella baltica OS223: Sbal223_0707
Entry
Sbal223_0707      CDS       T00803                                 
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
sbp  Shewanella baltica OS223
Pathway
sbp02020  Two-component system
sbp02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sbp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Sbal223_0707
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Sbal223_0707
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbp03021]
    Sbal223_0707
Transcription machinery [BR:sbp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Sbal223_0707
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID DksA-like_N
Other DBs
NCBI-ProteinID: ACK45226
UniProt: B8E9L1
Position
complement(847992..849470)
AA seq 492 aa
MKASLQLKLGQQLTMTPQLQQAIRLLQLSSLELQQEIQQALDSNPLLELEEDQFDATKDP
VNQTLSDTDFSESSTLPPEKDSSTIDTAESLTKESMPDELPMDTTWDEVFTASPNSGPGG
SREDDMPFQGETSEGLYEHLEWQKNLTPFSETDLAIATAIIDAIDDQGYLTQSTDEILEA
MGNSEVELDEVEAVLKRIQHFDPIGVAARDLSECLLIQLSHFAADTPNLENARMLIKDHL
DLIAARDFRLLMRKTKLKEDELRDGIALIQTLNPRPGLLITPNDDEYVIPDVSVSKKNGR
WVVELNPDCMPKINVNQHYASMARSTKSQADSQFIRGHLQEAKWFIKSLESRNDTLLKVA
NCIVQYQQGFFEYGEEAMKPMVLNDIAEAVEMHESTISRVTTQKYMHTPKGLFELKYFFS
SHVGTDDGGECSSTAIRAFIKKLVAAENQKKPLSDSKMAQLLAEQGINVARRTIAKYREA
MLIPPSNQRKSL
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgaaagcgtcactccagctcaaactgggtcaacagttaaccatgacgccacaattacaa
caggccatacgtctgttgcaactgtcgtcattagaactgcagcaagagatccagcaagcc
ttagattctaatccccttctcgagctggaagaggatcaattcgacgccactaaagaccct
gtaaaccaaacgctatccgatacggatttcagtgaatctagcaccctaccgccagaaaaa
gacagctccaccatagatacggcagagtcgctcacgaaagagtccatgcccgacgaactg
cccatggacaccacttgggatgaagtgtttaccgcctcccccaattctggccccggcggc
agtcgtgaagacgatatgcccttccaaggtgagaccagtgaaggcttgtatgaacactta
gaatggcaaaaaaacctcacgccgttttctgaaaccgatttagccattgccaccgccatt
attgatgccatcgacgatcaaggctatctcacccaaagcactgacgaaatcctcgaagcc
atgggcaattctgaggttgagctcgacgaagtcgaagctgtactcaagcgcattcaacac
tttgatcccattggtgttgccgcccgcgatttaagcgagtgcctgttgatccaactgtcg
catttcgccgctgacacgcccaacctagaaaacgcccgcatgctgatcaaagatcattta
gatctgatagccgcccgcgattttagattgttgatgcgtaagactaaattaaaagaggat
gaattaagagacggcatcgcgcttatccaaaccctcaatccccgcccaggtttattgatt
acgcccaacgatgacgaatacgtcatcccagatgtgtcagtgtcgaagaaaaatggccgc
tgggtggttgagctgaatcctgactgcatgccaaaaatcaatgtaaaccaacattatgcc
tcgatggcgcgcagcactaaaagccaagccgatagccaatttattcgtggtcatctgcaa
gaggctaaatggtttatcaagagtttagagagccgtaatgataccctgttgaaggtggcg
aactgtatcgtccaatatcagcaaggtttctttgaatacggtgaagaagccatgaaacct
atggtgcttaacgatattgccgaagcggtagaaatgcatgagtcgaccatctcacgggtg
acgacacagaaatacatgcatacccctaagggactttttgaactaaaatacttcttctct
agccacgtcggtactgacgatggtggggagtgctcatccacagcaatcagagccttcatt
aagaaactggttgcagcggaaaaccagaaaaaaccattaagcgacagtaagatggcacag
cttctggcagaacaagggatcaacgtagcccgcagaaccattgcgaagtaccgagaggct
atgctcattccgccttctaatcagcgtaaaagtttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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