KEGG   Shewanella baltica OS223: Sbal223_1783
Entry
Sbal223_1783      CDS       T00803                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
sbp  Shewanella baltica OS223
Pathway
sbp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Sbal223_1783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbp03400]
    Sbal223_1783
DNA repair and recombination proteins [BR:sbp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Sbal223_1783
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 GIY-YIG HHH UVR HHH_2 HHH_3
Other DBs
NCBI-ProteinID: ACK46288
UniProt: B8E715
Position
2098523..2100355
AA seq 610 aa
MMSNEFNAQSFLRTVSSSAGVYRMYDVKNDVIYVGKAKDLKKRLTSYFRKNLANVKTQAL
VSHIHHIDVTLTHSETDALLLENDYIKQYMPKYNVLLRDDKSYPYILLSQHEHPRLAYHR
GPQREKGHYFGPYPNGGAVRESLHLMQKLFPIRQCDDLYYKSRSRPCLQYQLSRCSAPCV
GKVSNADYDEQVKLASLFLKGKDQQVISALVDKMELAAERQAYEQAARFRDQIMALRKVA
EQQEVSNNKGDMDVIGVHYSSGIACFHLLFIREGKIFGSRSYYPSVPAQTDMDEVLRSFI
LQFYLNADIQRTIPKEVVISHNFEELHELEAAISEALDKKFSIKTNVRADRASFLRLAVT
NATNAVITRLSHKNTVEQRFVLLEEILELSAPIQRMECFDISHTMGESTVASCVVFNREG
PHKGEYRRYNIEGITPGDDYAAMKQAVSRRFDKIEAGGKIPDILFIDGGLGQLRIAQKIV
DEKFVHLDKAPQLIGVAKGEGRKPGLETLILGDTETSFSLEGDSPALHLIQHIRDESHRF
AITGHRNRRQKTRNTSTLESIPGIGPKRRKALLQHLGGLQEVKGASVAELVKVPGISIEM
AQTIHDALRG
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgatgtcgaatgaatttaacgcccaaagttttttacgtacggtttcatcctccgctggg
gtttatcgcatgtatgacgtcaagaatgacgtcatttatgtgggtaaagccaaagatctc
aaaaaacggcttacctcgtattttcgtaaaaacctcgctaatgttaagactcaagcctta
gtctcgcatattcaccatattgatgtgacgctgacccacagcgaaaccgatgctctgttg
cttgagaatgattacatcaagcaatacatgccaaaatacaatgtgttattgcgtgatgac
aaatcttatccttacatactgttaagccagcacgaacacccaaggcttgcttatcatcgt
ggtccgcagcgggaaaaaggccactattttggcccttatcctaacggcggcgccgtgcgt
gaaagcctgcatttaatgcagaagctgtttccaattcgtcaatgtgacgacctttactac
aagtctcgctcacgcccctgtttacaatatcaactttcccgttgtagcgcgccctgtgtg
ggtaaagtcagcaacgctgattacgacgagcaagtgaaactcgccagcctgtttttaaag
ggcaaagatcagcaagtgatcagcgccttggttgacaaaatggagcttgcggctgagcga
caagcttatgagcaagctgcacgatttcgcgatcagatcatggcgctgcgtaaagtcgcc
gaacaacaggaagtatcgaataataaaggcgatatggatgtcatcggtgtgcattattcg
tcgggcatcgcctgtttccatttgttgtttatccgcgagggtaaaatttttggcagtcgc
agctattatccttccgtgcccgcccaaaccgatatggacgaagtgctgcgctctttcatc
ctgcagttttatttaaatgcggatattcaacgcacgatcccaaaggaagtggtgattagc
cacaactttgaagaattgcatgaactcgaagcggcaatttcagaagcgttagataaaaag
ttttcgattaagaccaatgtacgtgccgatagggcgagcttcttgcggttagccgtgacc
aatgcgacgaatgccgtgattacgcgcttgtcccataaaaatacggtcgaacagcgtttt
gtgttacttgaggaaatcctagaattgagtgcgcctattcaacggatggaatgttttgat
atcagtcataccatgggggagagcacagttgcctcctgtgtggtattcaatcgggaaggg
ccgcataaaggtgaatatcgtcgctataatatcgagggtattacaccgggcgatgattac
gcggcaatgaagcaagcggtgagtcgccgtttcgataagattgaggcgggcggtaaaatc
cctgacattctgtttatcgatggtggactcgggcagttgcgtatcgcccagaagatagtg
gatgaaaagtttgtccatttagataaagcaccgcagctcattggggtggcgaaaggcgag
ggccgtaaacctgggctcgaaaccttaatcttaggggataccgaaaccagcttttccctc
gaaggtgattcgcctgcgttgcacctgattcaacatattcgcgatgagtcccatagattc
gcgataacaggccatcgtaatcgtcgccagaaaacccgcaatacttccacattggaatct
attccaggaattggccctaaacgccgtaaagctttgttacagcatttaggtgggttgcaa
gaagtgaaaggggcaagtgtggcggaattagtcaaagtaccagggatcagcatagaaatg
gcacaaaccattcatgatgcattgcgagggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system