KEGG   Shewanella baltica OS223: Sbal223_2427
Entry
Sbal223_2427      CDS       T00803                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
sbp  Shewanella baltica OS223
Brite
KEGG Orthology (KO) [BR:sbp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sbp03016]
    Sbal223_2427
Enzymes [BR:sbp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Sbal223_2427
Transfer RNA biogenesis [BR:sbp03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Sbal223_2427
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC TFA2_Winged_2
Other DBs
NCBI-ProteinID: ACK46922
UniProt: B8E7G3
Position
complement(2900199..2901308)
AA seq 369 aa
MSAFQYVSDEASLNALVAQYKQSKILVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVA
LPDLAQFWALLSDPNIIKLVHSCSEDLEVFAHYGKCQPTPLFDSQIAASLCGMGHGVGYA
KLVETCLGEVIDKGESRTDWIRRPLTEAQLSYAANDVLYLYQLYPQLEAKLSAQGRLAWL
YEEGERMTQGRLADPDLDTAYLKVKNAFQLTEIQLAYLKVLAKWRLEKALVRDLALGFVV
KDHGLIALAKKQPKSSADLFKLNDLTEQEKRIHGKDLLRVLQTADLVNLPELVDVLALKS
GYKSAFKAIKSCLVELCEQHDVPQEMLGSKRHIHEFLQWRWDKQQGDLPAVLCGWRGEIA
AESLAKLEV
NT seq 1110 nt   +upstreamnt  +downstreamnt
ttgtcagcgtttcaatatgtgagtgatgaagcaagccttaatgccctcgttgcccaatat
aaacagagtaagatactcgtgttagataccgagtttgttcgtactcgtacttattatgcc
aagttaggtttgatacaagcttatgatggtaaaaccttagctttgattgatcctgtggct
ttacctgatttagcccagttttgggcgctgttatcggacccgaatatcattaagttagtg
cattcctgcagtgaagacttagaagtgtttgcccattatggtaaatgtcagcctacgcct
ttgtttgatagccaaattgcagcttctttgtgtggaatgggccatggtgtaggttatgca
aagttagttgaaacttgccttggtgaagtgatcgataaaggtgagtcacgtaccgattgg
atccgccgccctttaacggaagcacagttaagctacgccgcgaatgacgtcttgtacttg
tatcagctctatcctcaacttgaagcgaaactcagcgcccaagggcgtttagcttggtta
tacgaggaaggggaaaggatgacccagggcaggcttgccgatcctgatctcgacacggct
tatttgaaagtgaaaaatgctttccaactgactgaaatccaattggcttaccttaaagtg
cttgctaagtggcgtcttgaaaaagctttagtgcgtgatttagctctaggttttgtggtc
aaagatcatggtcttatcgcattagcgaagaagcaacctaaatcctcggccgacttgttt
aagctcaatgatttgactgagcaagaaaaacgtatccacggaaaagatttattacgtgtg
ctgcaaaccgctgatttggtcaatttacccgaattagtggatgtgttggcgttaaaatca
ggctacaaatcggcctttaaggcgattaaaagctgcttagtcgagttgtgcgaacagcat
gatgtgccgcaggaaatgctcggttctaaacgtcatatccatgagtttttgcaatggcgt
tgggataagcaacaaggggatttgcctgcggtgttatgcggatggcggggcgagattgcc
gctgagtccctagctaagcttgaggtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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