KEGG   Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101046045
Entry
101046045         CDS       T04350                                 
Symbol
OPN1SW
Name
(RefSeq) short-wave-sensitive opsin 1
  KO
K04252  short wavelength-sensitive opsin
Organism
sbq  Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Brite
KEGG Orthology (KO) [BR:sbq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:sbq04030]
    101046045 (OPN1SW)
G protein-coupled receptors [BR:sbq04030]
 Rhodopsin family
  Vision
   Opsin
    101046045 (OPN1SW)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srv 7tm_4 7TM_GPCR_Sru CAA3_Cox_suIV WBP-1 ICMT
Other DBs
NCBI-GeneID: 101046045
NCBI-ProteinID: XP_003921059
UniProt: O13092
Position
Unknown
AA seq 349 aa
MSKMPEEEEFYLFKNISSVGPWDGPQYHIAPVWAFQLQAAFMGIVFLAGLPLNSMVLVAT
VRYKKLRHPLNYVLVNVSVGGFLLCIFSVLPVFVNSCNGYFVFGRHVCALEGFLGTVAGL
VTGWSLAFLAFERYIVICKPFGNFRFSSKHALMVVLTTWTIGIGVSIPPFFGWSRYIAEG
LQCSCGPDWYTVGTKYRSEYYTWFLFIFCFIVPLSLICFSYAQLLRALKAVAAQQQESAT
TQKAEREVSRMVVVMVGSFCVCYVPYAALAMYMVNNRNHGLDLRLVSIPAFFSKSSCIYN
PIIYCFMNKQFRACIMEMVCGKAMTDESDISSSQKTEVSTVSSSQVGPN
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgagcaagatgccagaggaagaggagttttatctgttcaagaacatctcctcggtgggg
ccgtgggatgggcctcagtaccacattgcccctgtctgggccttccaactccaggcagct
ttcatgggcattgtcttccttgcagggttacccctgaattccatggtgctggtggccaca
gtgcgctacaaaaagttgcggcatcccctcaactacgttctggtcaacgtgtccgtggga
ggcttccttctttgcatcttctctgtcctccctgtgttcgtcaacagctgtaatggatac
tttgtctttggccgccatgtttgtgctctggagggcttcctgggcaccgtagcaggtctg
gtgacaggctggtcactggccttcctggcctttgagcgctacattgtcatctgtaagccc
ttcggcaacttccgcttcagctccaagcacgcactgatggtggtcctgactacctggacc
attggtattggcgtctccatcccacccttctttggctggagccggtacattgctgagggt
ctgcagtgttcatgtggccctgactggtacaccgtgggcaccaaatatcgcagcgagtac
tatacgtggttcctcttcatcttctgcttcatcgtgcctctctccctcatctgcttctcc
tatgctcagctgctgagggccctgaaagctgttgcagctcagcagcaggagtcagctaca
acccagaaggctgaacgggaggtgagccgcatggtggttgtgatggtaggatccttctgt
gtctgctacgtgccctatgcggccctggccatgtacatggtcaataaccgtaaccatggg
ctagacttacggcttgtcagcattcctgcgttcttctccaagagttcttgcatctacaat
cccatcatctactgcttcatgaataagcagttccgagcttgcatcatggagatggtgtgt
gggaaggccatgacagacgaatccgacataagcagctcccagaaaacagaagtttctact
gtctcatccagccaagttggccccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system