KEGG   Shewanella baltica OS117: Sbal117_1808
Entry
Sbal117_1808      CDS       T02013                                 
Name
(GenBank) Exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
sbs  Shewanella baltica OS117
Pathway
sbs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sbs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Sbal117_1808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbs03400]
    Sbal117_1808
Enzymes [BR:sbs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     Sbal117_1808
DNA repair and recombination proteins [BR:sbs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Sbal117_1808
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Sbal117_1808
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Sbal117_1808
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AEH13558
UniProt: A0A7U3ZAD1
Position
complement(2078044..2079462)
AA seq 472 aa
MKMKDDKAGSIFWHDYETFGANPAKDRPSQFAGIRTDLDLNIIGEPETFYCKQAPDYLPS
PEAILITGITPQLANLKGIPETEFMGRIQALFSQPNTCVAGYNSLRFDDEVTRYGFYRNF
IDPYAREWQNGNSRWDIIDLVRACYAFRPEGINWPTKEDGSPSFKLEHLTQANGLSHEKA
HDAMSDVYATIAMAKLIREKQPKLYQYYFDLRRKQAVSDQIDVLNMQPLVHVSSKISARN
GCTTLISPVAHHPTNKNAVICVNLAMDLTPLFELDIEQIKTRMYTPRADLAEDELPIAVK
QIHLNKCPFITSAKILSDEHAARLGIDKEFAREQYKRLKLHPELREKLALLFEHDDSRAT
TDPDLMLYSGGFFSQADKAKMEIIRHTLPQNLAALDLQFDDPRIPEMLFRYRARNYPELL
DYEESQRWREFCQSRLADQDYVLKLENLLQDTQVDETKQKLLAALCHYLREL
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgaagatgaaagacgataaagctgggtcgattttttggcacgactacgaaacctttggg
gctaacccggcgaaagacagaccctcgcaatttgccggtattcgaacggatttagatctc
aatattatcggcgagcctgagacattttattgcaagcaagcccctgattatttgccgtca
ccagaagcgatattgatcacagggatcactccgcagttagccaatttaaaaggcatccct
gaaactgagtttatggggcgtattcaagcactgtttagccagccaaacacctgtgtcgcg
ggctacaactcactgcgttttgatgatgaagtgacccgttatggcttttatagaaacttt
atcgatccctatgcccgtgaatggcaaaatggcaactctcgttgggatatcattgattta
gtacgcgcgtgttacgcatttagacccgaagggatcaattggccaaccaaggaagatgga
tctcctagttttaagctagaacatttgacccaagcgaatggtttaagccatgagaaagcc
catgatgccatgtctgatgtgtatgcaaccatcgctatggcaaaactcattcgcgagaaa
caacctaagttatatcagtactattttgacctgcgccgtaagcaagcggtgagcgatcaa
atcgatgtgctcaatatgcagccgttagtacacgtgagctctaagatcagtgctcgcaat
ggctgtacgacgttgatttcccccgtggcgcaccatccaaccaataaaaatgcagttatt
tgcgttaatttagccatggatttaacgccactctttgagctagatatcgagcaaattaaa
acgcgtatgtatacgccaagagccgatcttgccgaagacgaattaccgatcgcggtaaaa
caaattcatttaaataagtgcccttttatcacttcggctaaaatcctcagcgatgaacat
gccgctcgtttaggcatagataaagaatttgccagagagcaatataaacgccttaaactt
cacccagaactacgtgaaaaactggcgctattatttgagcacgatgacagcagagcgacc
acagatcccgatttgatgctctattcaggtggtttctttagccaagctgataaagcgaaa
atggaaatcatccgtcataccctaccgcaaaatttagcggcgctagacttgcagtttgat
gatccacgtatccctgaaatgctgtttcgttaccgcgcccgtaattaccctgaactactc
gattacgaagagtcgcagcgctggcgtgaattctgtcaaagtcgcttagccgatcaagac
tacgtacttaaattagaaaatctgctgcaagatacgcaagtggatgagactaagcagaag
ttactggctgccctttgtcattatttgcgtgaactttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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