KEGG   Shewanella baltica OS678: Sbal678_2950
Entry
Sbal678_2950      CDS       T01725                                 
Name
(GenBank) transcriptional regulator, AraC family
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
sbt  Shewanella baltica OS678
Pathway
sbt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sbt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Sbal678_2950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sbt03000]
    Sbal678_2950
   03400 DNA repair and recombination proteins [BR:sbt03400]
    Sbal678_2950
Enzymes [BR:sbt01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     Sbal678_2950
Transcription factors [BR:sbt03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    Sbal678_2950
DNA repair and recombination proteins [BR:sbt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Sbal678_2950
SSDB
Motif
Pfam: Ada_Zn_binding AlkA_N HTH_18 HTH_AraC HhH-GPD HHH DUF6233 HTH_3
Other DBs
NCBI-ProteinID: ADT95099
Position
complement(3432394..3434091)
AA seq 565 aa
MSTDRSSESAIKRDEIDSVHSLESSAGLLSASICREARMSRDPRFDGKFFVGVLTTGIYC
RTVCPAVAPKEQNVRYFDSAVKAAQAGLRPCLRCRPDSAPGSNPWKGTGTTLARAISLIE
AGALAGKSSGEPASTVTQLADRLGISSRYLNKLFTEGFGTSPKQYALYRQLLFAKQLLHQ
TQLPITQVALAAGFNSIRRFNEAFKQTLQLTPTQLRKTALTKAAKEHVVGRTTGFGEIDT
LGEFVPHYGLTLYQYYRPPLDWASQLAFYRLRAVTGMEWFTPQMSHPQASDAVQIADETN
VSAEAKADENGLEYGRCFAIGKMRGTVHIIHEPKLNRFKLAIALTEDSAVDELQLMVTEV
RRILDLDADMQQIEQGLSTLPSLGLTPFSGLRIPGAGSLFEAVCRAILGQQVTVVQATKL
LNILVEAYGECFSLNGREYRLFPTPEAIREASLTELKMPGARKLALNALAAFICEHPEAS
VDDWLSVKGIGPWTIAYAKLRGLGDPNVFLHSDLIVKKHLLALYIKNNKLDETAAAAVSY
PQLCEQLSQQIAPWGSYLTFQLWHQ
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgagtacagatagatcgtctgagagtgcgattaagcgtgatgaaatagactcagtgcat
tcactggaatccagtgcggggctactttctgcgtctatttgccgtgaggcgaggatgagc
cgcgatccgcgttttgatggtaagttttttgtgggcgtattaacgacgggcatttattgc
cgtaccgtgtgtcccgccgtcgcgccaaaagagcagaatgtgcgttattttgattcggcc
gtgaaagccgcacaggcgggattacgcccgtgtttgcgttgtcggcccgacagtgcgcca
ggttcaaatccgtggaaaggcacaggcacgacattggcgagggccattagtttaattgaa
gctggcgcattagcggggaaatcatcgggagagcctgcctcgactgtgacacaattggct
gacagattagggatcagtagtcgttatctcaataagctctttaccgaaggttttggcact
tcgcctaaacaatatgccttatacaggcagttactgtttgcaaaacaactgctacatcaa
acccaattacctatcacccaagtcgcgctggcggcgggtttcaacagtattcgccgtttc
aatgaggcatttaagcaaaccttacaattgacgccaacgcaattaagaaagaccgcttta
accaaggcggcaaaggagcatgttgttggacgaacaacaggattcggtgaaattgatact
ttgggtgaatttgtgccgcactatggattaaccctatatcaatactatcgccccccattg
gattgggcatcgcagctggcattttatcgcttacgtgcggtgacagggatggagtggttc
acgccgcaaatgagtcacccacaagcgagtgatgcagttcagattgcagatgaaaccaat
gtttcagcagaagccaaggctgacgagaacgggctcgaatatggtcgctgttttgccatc
ggcaagatgcgcggcacagtgcacattatccatgagcctaagctgaatcgtttcaaactt
gcgattgctttgaccgaagattccgccgttgatgagctgcaattgatggtcactgaggtg
cggcgcattttagatctcgatgcggatatgcagcagattgagcaaggtttaagtacgctg
ccgagtttaggtttaacaccgttttcgggattgcgcattcctggcgcaggatctttgttt
gaagcggtttgccgcgcgattttgggccagcaagtgacggtcgtgcaggcaactaagtta
ctgaatatattggttgaagcctatggcgagtgttttagtctcaatggccgcgagtatcga
ttattcccaacacccgaggcgattcgtgaggcgagtttaactgagctaaaaatgccgggc
gcccgtaaattagcgctcaatgcgctcgcggcgtttatctgcgaacatcctgaggcgagt
gtcgatgattggcttagcgttaaaggcataggtccttggacgatagcgtatgccaagctt
cgtggcttgggcgatccaaacgtgtttttacattcggatttgattgttaaaaagcattta
ttggccttatatatcaagaacaataagttagatgaaacggccgccgcggcagtgagctat
ccccaattgtgcgagcagctgagtcaacaaattgccccgtggggcagttacttaaccttt
cagctctggcatcaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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