KEGG   Sphaerochaeta globosa: SpiBuddy_0873
Entry
SpiBuddy_0873     CDS       T01439                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sbu  Sphaerochaeta globosa
Pathway
sbu03030  DNA replication
sbu03430  Mismatch repair
sbu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SpiBuddy_0873
   03430 Mismatch repair
    SpiBuddy_0873
   03440 Homologous recombination
    SpiBuddy_0873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbu03032]
    SpiBuddy_0873
   03400 DNA repair and recombination proteins [BR:sbu03400]
    SpiBuddy_0873
Enzymes [BR:sbu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SpiBuddy_0873
DNA replication proteins [BR:sbu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SpiBuddy_0873
DNA repair and recombination proteins [BR:sbu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SpiBuddy_0873
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ADY12700
UniProt: F0RYC9
Position
938811..939404
AA seq 197 aa
MNYVAIDFETANGYPGGACSVALARFDEEGMLLDTYYSLIHPKHPYFDPSMTAVHQLKDE
ECLAAPEFDVIWPQMRDFIGKDLLVAHNAVFDMGVLKGCFEVYDLEARQMTYLCTLTIAR
KVWPKMLSYKLSYLVDYYGMEYQAHYALDDAIMCGKMMHKLCYGHLYEMLDLRRFLITKG
IEPKFIENQRKDADFFL
NT seq 594 nt   +upstreamnt  +downstreamnt
atgaactatgttgcaatagattttgaaacggcgaatggatatccgggcggcgcttgctcg
gtcgctttggctcgatttgatgaagaagggatgttgctggacacgtattattcacttatt
catccaaagcacccgtatttcgatccaagcatgacagcggtgcaccaactcaaggacgaa
gaatgccttgccgctcccgaattcgatgtgatttggccgcagatgcgggacttcatcgga
aaagatttgttggtggcccacaacgcagtcttcgatatgggcgtactcaaaggatgcttt
gaggtgtatgacctggaagcacggcaaatgacctatctctgtacgctgactattgcaagg
aaagtctggccgaagatgctcagctacaaactaagctacttggtggactactatggaatg
gaatatcaggcgcattatgcccttgatgatgcaatcatgtgcgggaaaatgatgcacaag
ctttgttacgggcacctgtacgagatgctcgacctacgccgctttttgatcaccaagggc
attgagccgaaatttatcgagaaccagcgaaaagacgcagattttttcctataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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