KEGG   Salmonella bongori serovar 48 z41 --: N643_00400
Entry
N643_00400        CDS       T03249                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
sbv  Salmonella bongori serovar 48:z41:--
Brite
KEGG Orthology (KO) [BR:sbv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbv03021]
    N643_00400
Transcription machinery [BR:sbv03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     N643_00400
SSDB
Motif
Pfam: RapA_C Tudor_RapA Tudor_1_RapA Helicase_C SNF2-rel_dom ResIII DEAD AAA_34 Flavi_DEAD
Other DBs
NCBI-ProteinID: AID23963
Position
complement(88613..91519)
AA seq 968 aa
MPFTLGQRWISDTESELGLGTVVAIDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLHVDEVKEENGLLTYVGTRLDTEEPNVMLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPYSGLRGQRTSLIPHQLNIAHEVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFETEQLVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSVDAPSREYMAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNKLGDLIGEQDIEPLLQAANSDRDDAQAARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTVKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSVYHNLINYLAAPEET
EGFDDLINSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQQLTQSIEEQDDDTSLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDIALSREDVQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEQSAR
ALIDNARREADEKLSGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESLDQAGWRLDAL
RLIVVTHQ
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaactgggacttgga
accgttgttgcgatagatgcacgaaccgtcactctactttttccgtccacaggggaaaac
cgtctgtatgcgcgcagtgattctcccgtgacccgcgtcatgttcaatcctggcgacacg
attacaagccatgaaggttggcagttacatgtcgatgaagtaaaagaagaaaatggtctg
cttacctatgtcggcacccgactggataccgaagagcccaatgtgatgctgcgtgaagtt
ctgctcgacagcaaattggttttcagtaagccccaggatcgtcttttcgccggtcaaatc
gatcgtatggaccggttcgcactgcgctatcgcgcccgtaaatttcagagcgagcagtac
cgtatgccgtacagcggcctgcgcggacagcgtaccagcctgattccgcatcagcttaac
atcgctcatgaggttggtcgtcgtcacgcgccgcgcgtgctgctggcggacgaagtgggc
ctcggtaaaacgattgaagccgggatgatcctgcatcaacagttgttatccggcgccgca
gaacgcgtattgatcattgttccggaaacgctacaacaccagtggctggtagaaatgctg
cgccgtttcaacctacgctttgcgctgttcgacgacgaacgctacgccgaagcgcagcac
gatgcctataacccgtttgaaaccgagcaactggtgatctgctcgctggactttgctcgc
cgtaataagcagcgtctggaacatttgtgtgacgccgagtgggatttactggtggtcgac
gaagcgcaccatctggtatggagcgtcgatgcgccaagccgggaatatatggccatcgaa
caattagccgagcgtgtgccgggtgtactactgctgaccgccacgccggaacaactgggg
atggaaagtcactttgctcgcctgcgtctgctcgatccgaaccgtttccatgacttcgcg
cagttcgtggaagaacaaaaaaactaccgtcctgttgctgatgcagtggcaatgctgctg
gcaggtaataaactcagcaacgacgaactgaacaagctgggcgatctgatcggcgaacaa
gatatcgagccattactacaggccgccaatagcgatcgcgatgacgcgcaggccgctcga
caggagctggtgtccatgttgatggatcgccacggcaccagccgcgtgctgtttcgcaac
acccgtaacggcgtgaagggtttcccgaaacgcgaattgcatacggtgaagctgccgcta
ccgacccagtatcagaccgccattaaggtctccggtattatgggcgcacgtaaaagcgcg
gaagatcgcgcccgcgatatgctctatccggaacagatttatcaggaatttgaaggcgat
accggtacatggtggaacttcgatccacgtgttgagtggctgatgggttacctgaccagc
caccgttcgcagaaggtactggtgatctgcgccaaggcgaccaccgccttacagctggaa
caggtgctgcgcgagcgtgaagggatccgcgccgccgtgttccatgaaggcatgtcgatt
atcgaacgcgaccgcgccgccgcctggttcgccgaagaagatactggcgctcaggtgctg
ttatgttccgaaatcggctccgaaggacgcaacttccagttcgccagcaatctggtgatg
tttgatctgccgtttaacccggatctactggaacagcgtattggtcgtctggatcgtatc
ggccaggcgcatgatatccagatccatgtcccgtacctggaaaaaaccgcccagtcggtg
ctggttcgctggtatcacgaaggactggacgcctttgaacacacctgcccaaccggccgc
gccatttatgattcggtctaccacaacctgattaattatctggccgcgcctgaagaaacc
gaagggtttgacgatctaattaactcctgccgcgaacagcatgaagcgctaaaagcccag
ttagaacagggccgcgaccgcctgctggagatccactcaaacggcggcgaaaaagcgcaa
cagctgacgcaaagtattgaagaacaggatgatgataccagtctgatcgcgttcgccatg
aacctgttcgatattgtcggcattaaccaggacgatcgcggcgacaatctgattgtactg
acgccgtccgatcacatgctggtgccggatttcccgggcctgccggaagatggctgcacg
attacgtttgaacgtgacatcgcgctgtctcgcgaagatgtgcagttcattacctgggaa
catccgttgatccgtaacggactggatctgatcctgtccggcgacaccggcagcagcact
atttcgctgttaaaaaataaagcgctgccggtaggtacgctactggtcgaactgatttat
gtcgttgaagcgcaggcaccgaaacaactgcaactgaaccgcttcctgccgccgacgccg
gttcgtatgctgttagataaaaacggcaacaatctggccgctcaggttgagtttgaaacc
tttaaccgtcagttaagcgccgttaatcgccacaccggcagcaaactggtcaacgccgtt
caacaggacgtccacgccattttgcaactgggcgagacccagatcgaacagtccgccagg
gcactgattgataatgctcgtcgcgaggctgatgaaaaactgtccggggaattgtcacgt
ctggaagcgctgcgcgccgtcaacccaaacattcgtgatgatgaacttgccgctatcgac
agtaaccgtcagcaggtactggaaagcctggatcaggcgggctggcgtctggacgctttg
cgtcttatcgtcgtcacgcaccaataa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

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