KEGG   Staphylococcus carnosus subsp. carnosus: SCA_0722
Entry
SCA_0722          CDS       T00863                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sca  Staphylococcus carnosus subsp. carnosus
Pathway
sca00010  Glycolysis / Gluconeogenesis
sca00020  Citrate cycle (TCA cycle)
sca00260  Glycine, serine and threonine metabolism
sca00280  Valine, leucine and isoleucine degradation
sca00310  Lysine degradation
sca00380  Tryptophan metabolism
sca00620  Pyruvate metabolism
sca00630  Glyoxylate and dicarboxylate metabolism
sca00640  Propanoate metabolism
sca00785  Lipoic acid metabolism
sca01100  Metabolic pathways
sca01110  Biosynthesis of secondary metabolites
sca01120  Microbial metabolism in diverse environments
sca01200  Carbon metabolism
sca01210  2-Oxocarboxylic acid metabolism
sca01240  Biosynthesis of cofactors
Module
sca_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sca_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sca_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sca_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sca00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SCA_0722 (pdhD)
   00020 Citrate cycle (TCA cycle)
    SCA_0722 (pdhD)
   00620 Pyruvate metabolism
    SCA_0722 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    SCA_0722 (pdhD)
   00640 Propanoate metabolism
    SCA_0722 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SCA_0722 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    SCA_0722 (pdhD)
   00310 Lysine degradation
    SCA_0722 (pdhD)
   00380 Tryptophan metabolism
    SCA_0722 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SCA_0722 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sca04147]
    SCA_0722 (pdhD)
Enzymes [BR:sca01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SCA_0722 (pdhD)
Exosome [BR:sca04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SCA_0722 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_oxidored NAD_binding_8 FAD_binding_2 HI0933_like 3HCDH_N FAD_binding_3 Lys_Orn_oxgnase DAO AlaDh_PNT_C UDPG_MGDP_dh_N NAD_binding_7 Thi4
Other DBs
NCBI-ProteinID: CAL27632
UniProt: B9DQ17
Position
724883..726289
AA seq 468 aa
MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGELGGVCLNVGCIPSKALLH
VSHVFQEAQHSDNLGIIAKDVELKFDKVQDFKKSVVNKLTGGVEGLLKGNKVEIVKGEAY
FHDSNSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFKFGERVIDSTGALNLQEAPKKLV
VVGGGYIGSELGTAFANFGTEVTILEGAKDILGGFEKQMTQPVKKKMKEKGIEIVTEAMA
KSAEETADGVKVTYEAKGEEKSIEADYVLVTVGRRPNTDEMGLEELGLKFADRGLLEVDD
QSRTSIKNIFAIGDIVPGLPLAHKASYEGKVAAEAISGEKSAVDYIGMPAVCFTEPELAT
VGYNEAQAKEEGLDYKASKFPYAANGRALSLDDTTGFVKLLTLKEDGTLIGAQVVGTGAS
DIIAELGLAIESGMNAEDIALTVHAHPTLGEMSMEAAEKAIGLPIHTM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggtagttggtgattttccaattgaaacagatactattgtaatcggagcaggtcctggg
ggttatgttgcagcaatccgcgcagcacaattaggacaaaaagttacaatcgttgagaaa
ggcgaattaggcggtgtatgtcttaacgtaggatgtatcccatctaaagcattattgcac
gtttcacacgtattccaagaagcacaacattcagataatttaggtattatcgctaaagat
gttgaacttaaatttgacaaagttcaagacttcaaaaaatctgttgttaataaattaact
ggcggtgttgaaggattattaaaaggaaacaaagttgaaattgtaaaaggtgaagcttac
ttccacgacagcaacagcttacgtgttatggatgaaaaaagtgctcaaacttacaacttc
aaaaatgcaatcattgctacaggttctagaccaattgaaattcctaatttcaaattcggc
gaacgtgttatcgactcaacaggtgctttaaacttacaagaagctcctaaaaaattagtc
gtagtaggcggcggttacattggttctgaattaggtacagcatttgcgaacttcggtaca
gaagttactattttggaaggtgccaaagatatcttaggcggtttcgaaaaacaaatgaca
caacctgttaagaaaaaaatgaaagaaaaaggtatcgaaatcgttactgaagcaatggct
aaatctgctgaagaaactgcagacggtgttaaagtaacttacgaagctaaaggcgaagaa
aaatcaatcgaagctgattacgttttagttacagttggacgtcgtccaaacactgatgaa
atgggtcttgaagaattaggacttaaatttgcagaccgcggattattagaagttgacgat
caaagccgtacttctattaaaaacatttttgctatcggcgatatcgttcctggtttacca
cttgcacataaagcaagttatgaaggtaaagttgctgctgaagcaatttcaggtgaaaaa
tctgcagtagattacattggtatgcctgctgtatgtttcactgaaccagaattagcaact
gtaggttataacgaagctcaagctaaagaagaaggcttggattacaaagcttctaaattc
ccttacgctgctaatggtcgtgccttatcattagatgatactactggatttgttaaattg
ttaacacttaaagaagatggtactttaatcggcgcacaagttgtaggtactggtgcttct
gatatcatcgctgaattaggtttagctatcgaatctggtatgaacgctgaagatatcgca
ttaacagtacatgctcacccaactttaggtgaaatgagcatggaagctgctgaaaaagca
atcggattaccaatccacactatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (86)   

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