KEGG   Staphylococcus carnosus subsp. carnosus: SCA_0941
Entry
SCA_0941          CDS       T00863                                 
Name
(GenBank) putative radical SAM superfamily protein
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
sca  Staphylococcus carnosus subsp. carnosus
Brite
KEGG Orthology (KO) [BR:sca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sca03016]
    SCA_0941
Enzymes [BR:sca01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     SCA_0941
Transfer RNA biogenesis [BR:sca03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    SCA_0941
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM TRAM_2 Dor1
Other DBs
NCBI-ProteinID: CAL27849
UniProt: B9DPB5
Position
948517..950058
AA seq 513 aa
MNEEQRKAGSLDVIAQRNKKEKDYSQYFETVYQPPSLKEAKKRGKEDVQYNRDFQIDERF
KEMGKGRTFFIKTFGCQMNAHDTEVMAGIFEALGYTLAEDILKADVILLNTCAIRENAEN
KVFSEIGNLKHLKRDRPDCLIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHKLPEIL
EEAYMSKAMVIDVWSKEGDVIENLPKVRDDYFKAWVNIMYGCDKFCTYCIVPFTRGKERS
RRPQDIIDEVRDLARQGYQEITLLGQNVNSYGKDLKDIEYDLGDLFEDISKIDIPRVRFT
TSHPWDFTDHMIDVIAKGGNIVPHIHLPVQSGNDAVLKIMGRKYTRESYLDLVNRIKTAI
PDVALTTDIIVGYPNETEEQFQETLSLYDEVEFEHAYTYLYSQRDGTPAARMKDNVEKEV
KKDRLQRLNQKVGYYSERALKGYEGQVVTVLCEGSSKKDNEVLAGYTDKNKLVNFRGPKE
VIGKLVDVKIDEAKQYSLNGTFLHVHEPSAVKA
NT seq 1542 nt   +upstreamnt  +downstreamnt
gtgaatgaagaacaaagaaaagcaggttctttagatgttattgcacaacgaaataaaaaa
gaaaaagattatagtcaatacttcgaaacagtttatcaaccgccaagtttaaaagaagcg
aaaaaacgtggtaaagaagatgttcaatataatcgtgatttccaaatcgatgaaagattt
aaagagatgggcaaaggccgtacattcttcatcaaaacatttggttgtcaaatgaatgcg
catgatacagaagtaatggcaggtatatttgaagcacttggttatacattagcagaagat
attttaaaagcagatgtgattttacttaatacatgtgcaattcgtgagaatgctgaaaat
aaggtattcagtgaaatcggtaacttgaaacatttaaaacgtgaccgtccagattgctta
attggtgtatgcggctgtatgtcacaagaagaatcagttgtaaataagatattgaaatca
tatcaaaacgtagacatgatttttggtactcataatattcataaattaccagaaattctt
gaagaagcctatatgtctaaagctatggtgattgatgtatggtcaaaagaaggcgacgtt
attgagaatttacctaaagtccgtgatgattatttcaaagcttgggtgaatattatgtat
ggttgcgataaattctgtacatattgtattgtgccgtttacacgtggtaaagagcgcagc
agacgtccacaagatattattgatgaagtccgtgatttagcacgacaaggttatcaagaa
attactttattaggtcaaaacgtgaactcatatggaaaagatcttaaagatatcgaatat
gatttaggtgacttattcgaagatatttctaaaattgatatcccgcgtgtccgcttcaca
accagccacccttgggatttcactgaccacatgattgatgtcatcgcaaaaggcggtaat
attgttccgcacattcacttgccagtacaatcaggaaacgatgcagtattgaaaattatg
ggccgtaaatacacacgagaaagttacttagaccttgtaaatcgtattaaaacggcaatc
ccagatgtcgcactgacaacagacatcattgtaggttacccaaatgaaactgaagaacaa
ttccaagaaacactatctttatatgacgaagtcgaatttgaacatgcgtatacgtactta
tactctcagcgtgatggcacacctgctgcacgtatgaaagataacgtagaaaaagaagtg
aagaaagaccgcttgcagcgtttgaatcaaaaagtaggttactactcagaacgcgcatta
aaaggttatgaaggacaagttgtgactgtattatgtgaaggaagcagtaaaaaagataat
gaagtactagcaggttatacagacaaaaacaaacttgtgaacttcagaggaccaaaagaa
gtcattggtaaattggtggatgttaaaatcgacgaagcgaaacaatattcattaaatggc
actttcttgcatgtccatgaaccaagtgcggtgaaagcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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