KEGG   Serinus canaria (common canary): 103816335
Entry
103816335         CDS       T05755                                 
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
scan  Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:scan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:scan04121]
    103816335 (RLIM)
Enzymes [BR:scan01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103816335 (RLIM)
Ubiquitin system [BR:scan04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103816335 (RLIM)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING-like zf-RING_16 zf-RING_4
Other DBs
NCBI-GeneID: 103816335
NCBI-ProteinID: XP_009088539
UniProt: A0A8C9NRT6
Position
Unknown
AA seq 595 aa
MESSDSSDKGSIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSVEPSNGEDLENSQSDSEIPRS
ESPSVRQPGSERSSAEELTAEEASLPRGQRRARSRSPEQRRTRARTDRSRSPINAVSEAP
RRSHHNTSSQTLDHSSAGEAEGSSRTRQHVTLRQHMVGTEVPSENAVLFSPPETRPAPQA
AGSSETTGTSESTAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELS
YFMYSDSDADSTGATPSHNVETSEPQSGGGGASGNENADVSSGEVYEGGHEASSTSGARR
EGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKT
CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq 1788 nt   +upstreamnt  +downstreamnt
atggaaagctcagattctagtgataaaggaagtattgatcaatcagaagcccaacgtcag
agccagctggatcggttagacagagaagaagctttctatcaatttgtgaacaacctgagt
gaagaggactacaggcttatgagagataacaatttgctaggaacaccaggtgaaattact
gaagaagagttgctgagaaggctacaccaagttaaagaaggtccgccacagcaaaacagt
gatgagaatagaggtgcagagtccgcagaagatgtttcaaatggagattctataatagac
tggcttaattcagtccgacagactggaaatacaacacggagcgggcagcgaggaaaccag
tcctggagagcagtgagccggactaacccaaatagcggcgacttcagattcagtttggaa
ataaatgtcaaccgtaataatgggaacacgaatccagaaactgagaatgagccatctgta
gagccttccaatggggaggatttggaaaacagccaaagtgactctgaaattccaaggtct
gaatcaccatctgtaaggcagcctggatcagaaaggagcagtgcggaggagctgacagct
gaggaggcttcccttcctagagggcagaggagagccaggagtaggagtccagaacagcgg
cggacgcgggctaggactgatagaagtaggtcacctattaatgcagtgagcgaggcccct
cgcaggtctcatcacaacacatcatctcaaacacttgaccactcctcagcgggcgaggct
gagggcagctctagaaccaggcagcacgtgacgttaaggcagcacatggtggggactgag
gtgccaagtgaaaatgcagttctgttttccccccctgagacgaggcctgctcctcaagca
gcaggttcttcagaaaccacgggcaccagtgagtccacggctcctgggcagaggcctccc
accatagtgctggacctgcaggtgagaagagttcgcccgggtgagtaccggcagagggac
agcatcgccaacaggacccgctcgcggtcccagacccccaacaacacggtcacctacgag
agcgagcgcggaggcttccggcgcaccttctcccgctcggagcgggctggggtgagaact
tacgtcagcaccattaggatccccatccggaggatcttaaacacgggcctgagcgagacc
acgtcggtggccatccagaccatgctgaggcagatcatgacgggcttcggggagctcagc
tacttcatgtacagcgatagcgatgcagattccactggggcgactcccagtcacaatgtg
gagacttccgagccgcagagcggaggcgggggcgcctcgggcaatgagaatgcagatgtt
agctcaggggaggtgtacgagggggggcacgaggctagctcaacatctggtgccaggcgg
gaaggccggaatacgaggggatcggtcacttttgaagaaagtggttctctaccattcctt
agccttgcacagtttttcctactcaacgaagatgacgatgaccaaccgagaggactcacc
aaagaacaaattgacaacctagccatgaggaattttggtgagagcgacgctctgaaaacc
tgcagcgtgtgcatcacagagtacacggagggcaacaagctccgcaagctgccgtgctcg
cacgagtaccacgtgcactgcatcgaccgctggctgtcggagaactccacctgccccatc
tgccgcagggcagtcctggcctctgggaacagggagagtgtggtctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (13)   
   Pfam (13)   
All databases (30)   

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