KEGG   Serinus canaria (common canary): 103822617
Entry
103822617         CDS       T05755                                 
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
scan  Serinus canaria (common canary)
Pathway
scan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:scan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103822617 (SNRNP40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:scan03041]
    103822617 (SNRNP40)
Spliceosome [BR:scan03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    103822617 (SNRNP40)
 Complex C
   U5 SnRNP specific factors
    103822617 (SNRNP40)
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 eIF2A Cytochrom_D1 WDR54 WD40_like PROPPIN PD40
Other DBs
NCBI-GeneID: 103822617
NCBI-ProteinID: XP_030088213
Position
Unknown
AA seq 298 aa
MLLSGHEGEVYCCKFHPNGNTLASAGFDRLILLWNVYGDCDNFATLKGHSGAVMELHYNT
DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW
DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT
GLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK
IAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEIQ
NT seq 897 nt   +upstreamnt  +downstreamnt
atgctgctctcaggacacgagggggaggtttactgctgcaagttccaccccaatggcaac
accctggcctcagctggcttcgacaggctcatcttgctctggaacgtctacggggactgt
gacaactttgccaccctgaagggacacagcggggctgtcatggagctgcactacaacacg
gatggcagcatgctcttctcagcatccacggacaaaaccgtggctgtgtgggacagtgag
acaggggagagggtgaagaggctcaagggccacacgtcctttgtcaactcctgctaccct
gcccggaggggaccccagctcgtctgcaccggcagcgacgatggcactgtcaagctgtgg
gatatcaggaaaaaagctgctgtccagacattccagaacacctaccaggtcctggctgtc
accttcaacgacaccagtgaccagatcatctctgggggcattgacaatgacatcaaggtg
tgggacctgcggcagaacaagctcacctacaccatgcggggccacgccgactcggtgacg
ggcctgagcctcagctctgagggctcctacctgctctccaacgccatggacaacacagtt
cggatctgggacgtgaggccctttgcccccaaggagagatgtgtgaagattttccaggga
aatgtccataattttgaaaagaaccttctgaggtgctcctggtccccagatggcagcaaa
attgcagggggctctgctgacaggtttgtgtacgtgtgggacaccacctccaggaggatc
ctctacaagctgcctggccatgctggctctgtcaatgagctggccttccaccccgaggaa
cccatcattctctctgcatccagtgacaaaaggctctacatgggggagatccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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