KEGG   Serinus canaria (common canary): 103826724
Entry
103826724         CDS       T05755                                 
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
scan  Serinus canaria (common canary)
Pathway
scan04010  MAPK signaling pathway
scan04120  Ubiquitin mediated proteolysis
scan04140  Autophagy - animal
scan04144  Endocytosis
scan04620  Toll-like receptor signaling pathway
scan04621  NOD-like receptor signaling pathway
scan04622  RIG-I-like receptor signaling pathway
scan05132  Salmonella infection
scan05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:scan00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103826724 (TRAF6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    103826724 (TRAF6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103826724 (TRAF6)
   04140 Autophagy - animal
    103826724 (TRAF6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    103826724 (TRAF6)
   04621 NOD-like receptor signaling pathway
    103826724 (TRAF6)
   04622 RIG-I-like receptor signaling pathway
    103826724 (TRAF6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    103826724 (TRAF6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103826724 (TRAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scan04131]
    103826724 (TRAF6)
   04121 Ubiquitin system [BR:scan04121]
    103826724 (TRAF6)
Enzymes [BR:scan01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103826724 (TRAF6)
Membrane trafficking [BR:scan04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    103826724 (TRAF6)
Ubiquitin system [BR:scan04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    103826724 (TRAF6)
SSDB
Motif
Pfam: TRAF-mep_MATH zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-TRAF_2 zf-C3HC4_4 zf-RING_5 Med21 PspA_IM30 SlyX TRAF3_RING zf-RING_11 HAP1_N DUF4455 CENP-F_leu_zip U-box UPF0242 Spc29 ATG16 DUF1664 DUF16 HMMR_N DUF2730 ADIP DM Cortex-I_coil
Other DBs
NCBI-GeneID: 103826724
NCBI-ProteinID: XP_009100399
UniProt: A0A8C9U4W5
Position
Unknown
AA seq 545 aa
MSLLHSEGSCGGREAESGCCAAMASACSAAAKEESCAGGSAAGSAPASFSEETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVKCPNKGCSMKMELRHLEDHQLQCDFSTVECLQCQGTFPKNRLKEHMTQ
ECPRRQVCCPNCATSMAYEDKELHDQTCPLANIYCEYCNTVLIREQMPNHYDNDCPTAPV
PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPAL
FSHVSHAAYNCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL
EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL
PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMETKPELL
AFQRPTIHRNPKGFGYVTFMHLETLKQRTFIKDDTLLVRCEVLTRLDLNNVRREGFQARS
TDGAM
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgagcttgctgcacagcgagggcagctgcggaggccgggaggcggagagcggctgctgc
gcggccatggccagcgcctgcagcgccgccgccaaggaggagagctgcgccgggggcagc
gccgcaggcagcgcgcccgcatccttctccgaggagacgcagggctacgacgtggagttc
gacccgcccctggaaagtaaatatgagtgtcccatctgtttgatggctctccgggaagcg
gtgcagacgccatgcggccaccgtttctgcaaaggctgcattgtcaaatccataagagat
gcaggtcacaaatgtccagtagacaatgaaattctgcttgaaaatcaactttttcctgac
aacttcgccaaacgggaaatcctttcattaatggtcaaatgtcccaacaagggctgcagc
atgaagatggagctcaggcacttagaggaccaccagctgcagtgtgatttttccactgtg
gaatgcctgcagtgccaaggaaccttcccaaagaaccgtctgaaggagcacatgacccag
gagtgtccgaggcgtcaagtgtgttgcccaaactgtgccacctctatggcctatgaagat
aaagagcttcatgaccaaacctgcccacttgccaatatatattgcgaatattgcaacacg
gtgctcatcagggagcagatgcctaaccattatgacaatgattgtcctactgccccagtg
ccatgtttttacagtgcctttgggtgtcctgaaaagatgcaaaggaatgaactggcacga
catatgcaggagttcactcaggttcacatgaggatgatggctcagagttttcagaatatc
agtgttactgctgcaaatcctgtgcccttcatcaatggcctaccctttgagcctgccctc
ttctcacacgtgtcacatgctgcctacaactgcaatccagaagttgaaaacttcaaggaa
actattcagcagttggaaggtcgtctggtgagacaagatcaccaaatcagggaactcatt
gctaaaatggagactcagaacactcacatggcagaactcaaacgtactatacgaaatttg
gagggaaagattactgaaatggaggcacaacaatgtaatggtatttatatctggaagatt
gagaacttcagtggactgcagaaagcccaggaagaagagagacctgtagtgatgcacagt
cctggcttctatacagggaagcctggctacaagctgtgcttgcgcctgcatatccagtta
ccaaacgctcagcgctgcgctaattttatctctctgtttgtgcacactatgcaaggggaa
tatgacagccacctgccctggcctttccaaggcaccattcgactttctattttggatcaa
tcagaaggcccagaaaggcagaaccacgaagaggtgatggaaaccaagccagagctgctg
gccttccagagaccgacaattcaccgcaatccaaaaggttttggttatgtgactttcatg
cacctggagaccttgaaacagagaaccttcatcaaggacgacacgctcctggtgcgctgc
gaggtgctcacgcgcctggacttgaacaatgtccgcagagaaggattccaggcccgcagt
actgatggagccatgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (9)   
   KEGG PATHWAY (9)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (30)   
   Pfam (30)   
All databases (52)   

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