KEGG   Staphylococcus capitis subsp. capitis: AYP1020_0875
Entry
AYP1020_0875      CDS       T03970                                 
Symbol
rsmE
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
  KO
K09761  16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Organism
scap  Staphylococcus capitis subsp. capitis
Brite
KEGG Orthology (KO) [BR:scap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:scap03009]
    AYP1020_0875 (rsmE)
Enzymes [BR:scap01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.193  16S rRNA (uracil1498-N3)-methyltransferase
     AYP1020_0875 (rsmE)
Ribosome biogenesis [BR:scap03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    AYP1020_0875 (rsmE)
SSDB
Motif
Pfam: Methyltrans_RNA PUA_4 Baculo_IE-1 UPF0728
Other DBs
NCBI-ProteinID: AKL92021
Position
complement(910567..911319)
AA seq 250 aa
MQRYFINQSADKLQRFFIENKEDIHHIKNVMRYSEGDSVIVTFLDQTVYKCQIKALNDNY
VELELKDKQNIDTELPQHITICSGLIKADKYEWMIQKATEMGANEFIAVGMDRSVVKLNE
SKVAKKLERWQKIIKEAAEQSYRLTIPNIYFKSNLQEIYDIISHYDYVLIAYEEQAKHGD
LSHFKQIIKQFKTQDRVLMIFGPEGGLSDKEVSLFSENSTLVGLGPRILRAETAPLYALS
AVSFEKELLG
NT seq 753 nt   +upstreamnt  +downstreamnt
ttgcaaagatattttattaatcaaagcgctgataaacttcagcgcttttttattgaaaat
aaagaagatattcatcatataaaaaatgtcatgcgttatagtgaaggtgattcagttatc
gttacatttctagatcaaacagtatacaagtgtcaaataaaagctttaaacgataattat
gttgaactagagttaaaagataaacaaaacattgatacagaattacctcaacatatcact
atttgtagcggattgattaaggctgataagtatgaatggatgattcaaaaagcaactgaa
atgggcgctaatgaatttattgcagttggtatggaccgttcagtagttaaattgaatgaa
tctaaagttgctaaaaagttagaaagatggcaaaaaattattaaagaagctgcagaacaa
agttatcgtttaacaattcctaatatttattttaagtcgaatttacaggaaatttatgat
attataagtcattatgactatgttcttatagcatatgaagaacaagctaaacatggtgat
ttaagtcattttaaacaaattataaagcaatttaaaacacaagatcgtgttttaatgata
tttggacctgaaggcggtttatctgataaagaagtgtctttattcagtgaaaatagtact
ttagtaggcttaggtccacgtattttacgggcagaaactgcacctctatatgctttaagt
gcagtgagttttgaaaaagaattattggggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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