KEGG   Streptomyces scabiei: SCAB_40281
Entry
SCAB_40281        CDS       T01187                                 
Name
(GenBank) conserved hypothetical protein
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
scb  Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:scb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:scb03016]
    SCAB_40281
Enzymes [BR:scb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     SCAB_40281
Transfer RNA biogenesis [BR:scb03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SCAB_40281
 Prokaryotic type
    SCAB_40281
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B
Other DBs
NCBI-ProteinID: CBG71105
UniProt: C9Z291
Position
4525530..4526522
AA seq 330 aa
MSHPPDPRHVEHPRLLDQGHPFRQWKTWRVPGTGLTLTGYSRANDKTFFHLPELRCSVDA
GLAEGRQVETVLLTHTHLDHSKDLDYLAARDAGVDIYLPAAAEPYAAAYLRAASELNHGA
GFDASRAPDCRLHGVRPGAEFSVGRRGEYAVRVVECLHKVPCVGYCFAEKKTVLKPEYEE
LKASMVAAGRAGEFGRIIAERRKEGPGTVDQEIRRPAFAFLGDTHPSVFARNPWLFDYPV
VITECTYLDDERLGRARQVGHTVWSELRPVVEAHPETLFVLTHFSLRHSDREVVEFFRRE
REKGGAGHLDNVVLWAHAESRLPEQHQKRG
NT seq 993 nt   +upstreamnt  +downstreamnt
atgtcccacccacctgacccgcggcacgtcgagcacccccgactcctggaccagggacac
ccgttccgccagtggaagacctggcgcgtccccggcaccggcctgaccctgaccggttac
tcccgcgccaacgacaagacgttcttccacctccccgaactgcgctgctccgtcgatgcc
gggctggccgagggccggcaggtggagacggtgctcctgacccacacccacctcgaccat
tccaaggacctggactatctcgccgccagggacgccggggtggacatctatctgccggcc
gccgccgaaccgtacgcggcggcctacctgcgcgctgcgagcgagctgaaccacggggcc
ggcttcgacgcgtcccgcgccccggactgccgtctgcacggggtgcgtccgggcgcggag
ttctccgtgggccgccgcggggagtacgcggtccgggtcgtcgagtgcctgcacaaggtg
ccgtgtgtcggctactgcttcgcggagaagaagacggtcctgaagccggagtacgaggag
ttgaaggcgtcgatggtcgccgccggccgggcgggtgagttcggccggatcatcgccgag
cggcgcaaggagggccccggtacggtcgatcaggagatccgccgccccgccttcgccttc
ctcggcgacacccacccgagcgtcttcgcgcgcaacccctggctgttcgactacccggtg
gtcatcaccgagtgcacctatctcgacgacgagcggctcggccgggcccggcaggtcggg
cacaccgtgtggagcgaactgcgtccggtggtcgaggcacacccggagaccctgttcgtg
ctgacccacttcagcctgcgccactccgaccgtgaggtcgtcgagttcttccgccgcgaa
cgggagaagggcggggccggacatctcgacaacgtcgtgctgtgggcccacgccgagagc
cgtctgccggagcagcaccagaagcgggggtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (71)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (82)   

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