KEGG   Streptomyces scabiei: SCAB_55901
Entry
SCAB_55901        CDS       T01187                                 
Name
(GenBank) putative sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
scb  Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:scb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scb03021]
    SCAB_55901
Transcription machinery [BR:scb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SCAB_55901
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_ECF MarR_2 HTH_28 ADSL_C
Other DBs
NCBI-ProteinID: CBG72616
UniProt: C9Z106
Position
6236905..6237480
AA seq 191 aa
MRKDSAVADERPHRARHRASQPSEPDEELMRALYREHAGPLLAYVLRLVAGDRQRAEDVV
QETLIRAWKNAGQLNRATGSVRPWLVTVARRIVIDGHRSRQARPQEVDPSPLEVIPAEDE
IDKALWLMTLSDALDDLTPAHREVLVETYFKGRTVNEAAETLGIPSGTVRSRVFYALRSM
KLALEERGVTA
NT seq 576 nt   +upstreamnt  +downstreamnt
gtgcgcaaggattccgctgtggccgatgaacgcccgcacagggcacgacatcgcgcatcg
cagccctcagagcctgatgaggagctgatgcgcgcgctgtaccgcgagcacgctggaccc
ttgctcgcgtacgtgctgcgtctggtcgcgggcgaccgccagcgtgccgaggacgttgtg
caggaaactctcatccgggcctggaagaacgccggtcagctcaatcgagcgaccggatcg
gtacgcccctggctggtgacggtcgcacgtcgcatcgtcatcgacggccaccgcagccgg
caggcccggccgcaggaggtcgacccgtcgccgctggaggtcatccccgcggaggacgag
atcgacaaggcgttgtggctgatgacactgtcggacgcgctggacgacctgacccctgct
cacagggaagtcctggtcgagacctatttcaaagggcgtacggtcaatgaggcggccgag
acgcttggcatccccagtggcaccgtccgctcccgggtgttctacgccctgcggtcgatg
aagctggctctagaggagcgcggggtgacggcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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