KEGG T01187: SCAB

Streptomyces scabiei: SCAB_78961

Entry

SCAB_78961        CDS       T01187

Name

(GenBank) putative polyketide synthase

Organism

scb Streptomyces scabiei

SSDB

Motif

Pfam:

Acyl_transf_1 ketoacyl-synt Ketoacyl-synt_C PP-binding Thioesterase KAsynt_C_assoc Thiolase_N Hydrolase_4

Other DBs

NCBI-ProteinID:

CBG74860

UniProt:

C9ZCS1

Position

complement(8720511..8724596)

AA seq 1361 aa
MRAVGDGAAGGLRRLIAERVALWGGTAAADVPMDRPLADLGMSSREAVALAGELSRATGR
ELPATLLWEATTGDALVALLCGTRTDPASAPGPPPGAPVSPGEPVAVVGVGCRLPGGVRG
PAEYWRALLDGVDAIRRVPEDRWRDFTPYPPADALPFGGYLDDIAGFDADFFRITPREAA
VMDPQQRILLEVVHETLDHAAVPAASLSGSATGVFVGVSASDYGQLTGADPAAVDPWAPA
GGALSVTAGRLAYVLDTRGPSMAVDTACSSSLVAVHHACVSLRTGESDLAIAAGVNLVLS
PAVTVAFRRAGALAPDGRCKPFSAAADGIGRGEGCAAVLLKRLCDAERDGDRILAVVRAT
AVNSDGRSGGLLAPNPAAQRALLTTACARAGLSPAHMDHVEAHGTGTPLGDPIEAGALGA
VLGRGRDPDQPLLLGSVKGNLGHLESAAGMAGLVKTVLALHHDLIPPTLHCAGGSSLEDG
TPLRVVTEAEPWPRYGGTATAGVSGFGFGGTNAHAVLEEWPPDAALPPPAQEPAARLHLL
SDAGPARVRDTAARLADWLDTPEGRAAHPGDVARTLAGRAGRGRVRAAVVAGAPAELADG
LRALAGGQPHAQVVVGDGDRLGPGPVWVFSGYGSQWPGMGRRLLAEEPAFAAAVEKLDAQ
LAPECGFSLYDQLATGGGLDRLEIAQPVLFGLQLALAELWRAHGAEPAAVIGHSLGEVAA
AVCAGALEVADGARVVAVRARLLGRLRGGAMAVVDLADDELDALARDFPDVHVAVHSSPG
QKVVTGREEQVARLVSRLEAEGRAARAMRVVGAGHSPQVEPLLPELTAELADVRGGPAHV
PVYSTVLDDPRGHGVFDAAHWAANLRRPVRLDRAVAAAAADGHTAFVELSPHPVLTRAIT
DTAPGSLALGTLRRDADSAAGFLTQVGVLHTAGLRLPVPPGRVIDLPGPRWRHTRHWWTD
RTAGGAAPEPSAAGAVDAGAAARDHLAARPEEGRTEDRTSVTDRLRHRIAAVTGHPAARV
TPATGLAELGLDSLMAVRIRTALEREFGIQLPLRDLLGAGTVEVTAARIQRALPAGATAT
EETTLTGLPGPHPLLHPLHASGPSSPLFLVHAAGGTTDVYRSLVERLGGERPVYGLERAD
EARTVVEKARRYADAVAAAHPEGPCLLGGWSFGGFVAQEAARLLTAAGRDVRLVLLLDSV
RPLPRPEGTGAERIRAHFTGFARHVADTYGVALDLPYDELAATEDDAERIDAVLRALSGA
ADVPSAVLDHQRASYLDLRIGEAHRPGRYDGQVVLYRATEPAPHTVRDPAYEREDEALGW
DEVCPRLTVVRVAGHHLSLLDPPYVDEIAADLRWRLAGETR

NT seq 4086 nt +upstreamnt +downstreamnt
atgagggccgtcggggacggcgcggcgggcgggctgcggcggctgatcgccgagcgggtg
gccctctggggcggcacggccgccgcggacgtgccgatggaccggccgctcgcggatctc
ggcatgtcctcgcgggaggcggtcgccctcgccggggagctgtcccgggcgacgggccgg
gagctgccggcgacgctgctgtgggaggcgaccaccggggacgcgctggtggcgctgctg
tgcggtacgcggacggaccccgcctccgctccgggcccgcccccgggggctcccgtgtcg
cccggcgaaccggtcgcggtggtcggggtcggctgccggctgcccggaggtgtgcgcggg
ccggcggagtactggcgggcgctcctcgacggcgtcgacgcgatccggcgggtcccggag
gaccgctggcgggacttcacgccgtacccgcccgccgacgcgctccccttcggcggctac
ctggacgacatcgccgggttcgacgcggacttcttccggatcaccccgcgcgaggccgcg
gtgatggacccgcagcagcggatcctgctggaggtggtccacgagacgctcgatcatgcc
gccgtcccggccgcgtccctctcgggcagcgccaccggtgtcttcgtcggggtctccgcg
tccgactacgggcagctcaccggcgccgatccggccgccgtcgacccctgggcgccggcc
ggcggggcgctgagcgtgacggcggggcggctggcgtacgtcctggacacgcgcgggccg
agcatggccgtcgacaccgcctgttcgtcgtcgctggtggccgtgcaccacgcctgtgtc
agcctgcgcacgggcgagagcgacctcgcgatcgccgccggggtcaacctggtgctctcc
ccggccgtcacggtcgcgttccggcgggcgggcgccctcgcacccgacgggcggtgcaag
ccgttctcggcggccgccgacgggatcggccggggcgaggggtgcgcggccgtcctgctg
aaacggctctgcgacgccgagcgggacggcgaccggatcctcgccgtcgtgcgggccacc
gccgtcaactccgacggccgttcgggcggcctcctggcccccaacccggccgcccaacgg
gccctgctgaccaccgcctgcgcccgggccggcctctcccccgcgcacatggaccacgtc
gaggcccacggcaccggcaccccgctcggcgacccgatcgaggcgggcgcgctcggtgcc
gtcctcggccgcggccgtgaccccgaccagcccctgctgctcggctccgtcaagggcaac
ctgggccacctggagtccgccgcgggcatggccggactggtgaagacggtgctcgcgctc
caccacgacctgatcccgcccacgctgcactgcgccgggggcagctccctggaggacggc
acaccgctgcgggtggtgacggaggccgagccgtggccccggtacggcggcaccgccacg
gccggggtctccgggttcgggttcggcggcaccaacgcccacgcggtgctggaggagtgg
ccgcccgacgccgctctcccgcccccggcacaggaacccgccgcccgcctgcacctcctc
tccgacgccggtcccgcccgggtccgcgacaccgccgcccggctggccgactggctggac
acgcccgaggggcgcgccgcacacccgggcgacgtggcacgcaccctcgccggacgcgcg
ggccggggaagggtgcgggccgcggtcgtggccggcgctccggccgaactggccgacggg
ttgcgcgcgttggccggtgggcagccgcacgcgcaggtcgtcgtgggcgacggggaccgc
ctcgggcccggcccggtgtgggtgttctccgggtacggcagtcagtggcccggcatgggg
cgccggctcctcgccgaggagccggccttcgccgccgccgtggagaagctggacgcgcag
ctggcccctgagtgcgggttctccctctacgaccagctggccaccggcggcggcctcgac
cgcctggagatcgcccaacccgtgctcttcgggctgcagttggcgctggcggagctgtgg
cgggcgcacggcgccgagcccgccgccgtcatcgggcactccctgggcgaggtggccgcc
gcggtgtgcgcgggcgcgctggaggtggcggacggggctcgtgtggtcgccgtacgggcc
cggctgctcggccggctgcggggcggggccatggcggtggtggacctcgccgacgacgaa
ctcgacgccctggcacgggatttcccggatgttcatgtcgccgtgcactcctcgcccggc
cagaaggtcgtgaccggccgggaggagcaggtggcccggctggtgagccggctggaggcc
gaggggcgggccgcgcgggcgatgcgggtggtcggggcgggtcactcgccgcaggtggag
ccgctgctgccggagctgacggcggagctggcggacgtccggggcggacccgcccacgtc
cccgtgtactccaccgtgctggacgacccgcgcggccacggcgtgttcgacgcggcgcac
tgggccgccaatctgcgcagaccggtacgtctggaccgggcggtcgcggcagccgccgcc
gacggccacaccgcgttcgtcgaactctcgccccacccggtcctgacccgggcgatcacg
gacaccgcgcccgggtccctcgccctcggcaccctccgccgcgatgccgactccgccgcg
ggcttcctcacccaggtgggcgtcctgcacaccgccgggctgcggctccccgtgcccccg
ggccgcgtcatcgacctgcccggaccccgctggcggcacacgcggcactggtggaccgac
cggacggcgggcggtgcggcgccggagccgtccgccgccggggccgtggacgccggggcc
gccgcccgggatcacctggcggcgcggccggaggaggggcggacggaggaccgtacctcg
gtcaccgaccggctccgccaccgcatcgccgccgtcaccggacaccccgcggcgcgcgtc
accccggccaccggcctcgccgaactgggcctggactccctgatggccgtccgtatccgc
accgccctggaacgcgagttcgggatccagctccccctgcgcgacctgctgggcgcgggc
accgtcgaggtcacggcggcccgcatccagcgcgcactgccggccggggcgacggccacc
gaggaaaccactctcaccggactccccggcccccacccgctgctccaccccctgcacgcc
tcgggcccctcctccccgctcttcctcgtccacgcggcgggcggcaccaccgacgtgtac
cggtcgctcgtggaacggctcggcggggaacggccggtgtacgggctggagcgggccgac
gaggcccgtacggtcgtcgagaaggcccgccggtacgccgacgcggtggccgccgcccat
cccgaggggccctgcctgctgggcggttggtcgttcggcggcttcgtcgcccaggaggcg
gcgcgtctgctgacggccgcggggcgtgacgtacggctggtgctgctcctcgactccgta
cggccgctcccccgtcccgagggcaccggggccgaacggatccgcgcgcacttcaccggt
ttcgcccgccacgtcgccgacacgtacggggtcgcactggacctgccgtacgacgagctg
gccgcgaccgaggacgacgccgagcgcatcgatgccgtgctgcgggctctgagcggggcg
gccgacgtcccgtcggcggtcctcgaccaccaacgggcctcctatctggacctgcggatc
ggcgaggcgcaccggccgggccggtacgacgggcaggtcgtgctctaccgggccaccgag
cccgccccgcacaccgtgcgcgaccccgcgtacgagcgggaggacgaggcgctcgggtgg
gacgaggtgtgcccgcgcctgaccgtcgtccgggtcgcgggccaccatctctcgctgctc
gacccgccgtacgtcgacgagatcgccgccgatctgcggtggcggctcgccggggagacc
cgctga

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (50)   

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