KEGG   Parasphaerochaeta coccoides: Spico_0396
Entry
Spico_0396        CDS       T01469                                 
Name
(GenBank) DNA repair protein RecO
  KO
K03584  DNA repair protein RecO (recombination protein O)
Organism
scc  Parasphaerochaeta coccoides
Pathway
scc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:scc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Spico_0396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scc03400]
    Spico_0396
DNA repair and recombination proteins [BR:scc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Spico_0396
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Spico_0396
SSDB
Motif
Pfam: RecO_N RecO_C
Other DBs
NCBI-ProteinID: AEC01625
UniProt: F4GHT7
Position
465872..466675
AA seq 267 aa
MDRDLTVDGIVLRTRRMGDMHRRLSLLCPDLGIIDVIAYGARKGKRAMNAQMFSRSTFFL
YHNPVRKEYTLKDARMESPHDGVRSRLDSMWAASFWSELCTRTAGGDWNALFLLLSECLD
ALEEDPSSVERASIQFVWHLLHLAGIAPDLTRCPVSERVYTHDEILGFSASLLSPCSREN
GDVDDMLLPPGARRYLAMTAGRAVREAVAVQLNDITALRIRRYMVRYAHLFAGGHLMTVE
SGFGMMDMDDESGNVSNEGSGDGSDDE
NT seq 804 nt   +upstreamnt  +downstreamnt
atggaccgcgacctgaccgtagacggcatcgtcctgcggacacggcgcatgggcgatatg
catcgccggctctccctgctttgtcccgacttgggtatcatagatgtcatagcctatggg
gcgcgcaagggcaagagggcaatgaatgcgcagatgttttcccgttctacgtttttcctg
tatcataatcctgtccgcaaggaatatacgttgaaggatgcccggatggagagtcctcat
gacggtgtgcgttcccgccttgacagcatgtgggcggcttcgttctggtcggagctgtgt
acccgcacggcgggcggtgattggaacgccctgttcctgttgctttccgaatgcctggac
gccctggaggaagacccttccagcgttgaaagggcgagcatccagtttgtctggcatctg
ctccatctggcggggattgcgccggatctgacgcgctgtccggtgagcgagagggtttat
acccatgatgagattctgggattttccgcttctctgctgtcaccctgttcacgggaaaac
ggggatgtcgatgacatgctgcttcctcccggcgcacggcgttatcttgccatgacagcc
ggacgcgcggtacgggaggcggtggccgtacaattgaacgacatcactgccctgcgaatc
aggagatacatggttcgctacgcgcatctttttgccggaggacatctgatgaccgtagaa
tctggctttggcatgatggacatggatgatgaaagcgggaatgtctccaatgaaggttcc
ggggatggttccgatgatgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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