KEGG   Gracilinema caldarium: Spica_0054
Entry
Spica_0054        CDS       T01573                                 
Name
(GenBank) Pectate lyase/Amb allergen
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
scd  Gracilinema caldarium
Pathway
scd00040  Pentose and glucuronate interconversions
scd01100  Metabolic pathways
scd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:scd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    Spica_0054
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Spica_0054
Enzymes [BR:scd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     Spica_0054
SSDB
Motif
Pfam: Pectate_lyase_4 Methyltransf_16
Other DBs
NCBI-ProteinID: AEJ18226
UniProt: F8EY67
Position
58711..60138
AA seq 475 aa
MKHNIHTWIPLGAVLSILVGTSCCSYGINSVETAKENTNFGGTIVSGLSEKELVISPNDS
SSGWVSYKGSADLAGDSVTPPSSPGGYGGIIYTVNNRAELLAALSSGSARIIYITSMIDM
TEGMLPSSGNESSNDLDAFIAKYTAEAISSYSLSSDYNATSYSAWKRLYASKVMYTNNPS
GDIVKVHNYLVNKWKSKIQIPVKSNTTIIGISSGCGIKGGTLVINNVQNVIIRNLLLQDA
YDPFPALEANDGLNANYDGISIQQSKYIWIDHCTLEDTLARSDNDFDSVTTSDGTKTKWQ
VYDGLCDITKTNDFVTISWCVFKNHDKTMLIGSSDSYTADINHQTITLHHNYFLNCRQRL
PMVRFATIHIYNNLYFMDATAGRTNSYAIGVRKDCSIVAENNYFAKGISYGFKDSYGRVY
NGNNIFEEGVQNSSNFTSTRPWEPSMYYEYDIHLANNIPNLVMRYAGAGVLTVQK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgaaacataatattcatacatggattccactcggggctgttctcagtatattggttgga
acttcttgctgtagttatggaataaattcagtggaaacagcaaaggaaaatactaatttt
ggagggactatagtttctggtctttctgaaaaagaacttgtaatttctcccaacgattct
agtagcggatgggtatcctacaaggggagtgccgatcttgctggcgactctgttactcca
ccgtccagccctggtggttatggaggaataatctatactgtcaataaccgggctgagctt
ttagctgccctatctagtggttctgctcgaattatctatattaccagtatgatcgatatg
actgagggaatgcttccttcatcaggaaacgaatcgagcaacgatcttgatgcttttatt
gcaaagtataccgcagaggcgatatcttcttattctttaagcagtgattataatgcaacc
tcttatagcgcttggaaaaggctttatgcaagtaaagtaatgtatacaaataatccttcg
ggggatattgtaaaagtacacaattatctcgttaataaatggaaaagtaaaatccaaata
cctgttaaaagtaatactacaataattggtatttcatctggttgtggtataaaaggtggg
actttagttattaataatgttcaaaatgttattatccgtaatctactgttgcaagatgct
tacgatccctttccagctttagaagcgaatgatgggcttaatgctaattatgatggtatt
agtattcaacagtcaaagtatatttggattgatcattgcactttagaagatacacttgct
cgtagtgataatgactttgactcagttacaactagtgatggtactaaaacaaaatggcag
gtatatgatgggttgtgtgatataacaaaaacgaatgattttgtcaccatttcatggtgt
gtctttaaaaatcatgataagaccatgcttattggaagtagtgatagctatacagctgat
ataaatcaccagactattacgttgcatcataattattttttaaattgtcgccagcgactt
cctatggttcgtttcgcaactatacatatatataataatttatattttatggatgccact
gcaggtagaaccaatagctatgctattggggttcgaaaggattgttctattgttgcagaa
aataattattttgctaaaggtattagttatggtttcaaagattcctatggtagagtttac
aatggaaataatatttttgaggagggtgtacaaaattcatcgaattttaccagtacaaga
ccttgggaaccttcaatgtactatgagtatgatatacatttagctaataatatacccaat
ctggtcatgcgttatgcaggggctggtgtacttaccgttcaaaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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