KEGG   Gracilinema caldarium: Spica_1243
Entry
Spica_1243        CDS       T01573                                 
Name
(GenBank) ATPase AAA-2 domain protein
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
scd  Gracilinema caldarium
Brite
KEGG Orthology (KO) [BR:scd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:scd03110]
    Spica_1243
Chaperones and folding catalysts [BR:scd03110]
 Heat shock proteins
  HSP100
   Spica_1243
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA Clp_N ClpB_D2-small AAA_5 Sigma54_activat AAA_16 AAA_22 UVR AAA_14 nSTAND3 Mg_chelatase AAA_18 TniB NACHT AAA_7 IstB_IS21 AAA_28 ResIII bpMoxR RNA_helicase AAA_3 T2SSE ATPase_2 AAA_24 AAA_33 AAA_30 NTPase_1 AAA_19 AAA_29 DUF815 KTI12 HerA_C Vps5
Other DBs
NCBI-ProteinID: AEJ19389
UniProt: F8F1Q5
Position
1400377..1402923
AA seq 848 aa
MFKGLTQRAQRILTVIAQDEARRFHSDQLLPEHILVAVIRDGSGTACRALEDLAIDLQDF
RHVLEREIPQKTGTFIFGDVPPSRRARTLLEAAAEEARSFGHEYVGTEHLLLASIREENS
PAARYLVEKHISPEMLRSTVQLVLGQIRDDGPVEDPRDSAHTAGSNPFGTGTPSGQKNTR
TPIIDEFSRDLTAMARLGSLDPVIGREKEVRRVVRILARRTKNNPILVGEPGVGKTAVVE
ALAQLIASENVPEILADKRLLALDLASVVAGTKYRGEFEERLKKIMKEISQAGNIILFID
EIHTVIGAGGAEGTIDASNMLKPALSRGEVQCIGATTLAEYRKHFEKDAALERRFQMVPV
EEPSLEETIQILKGIKKRYEEHHRVIYNDGAVLAAATLAQRYITGRFMPDKAIDLLDEAG
AKRKLETDIKPAELSEIENEIKRLTEEKVRLVAAQDYEKAAELRDQVRSLRYQLESVKQA
WERLSREERPAVTEADIRQVVAEATGIPLARLEESASRKLLRIEEELHRSVIGQDDAVQR
IAAAIRRSRAGVSSLKRPQGSFIFLGPTGVGKTLLAKRLAEYLFGTEEALVRIDMSDYME
KHNASRLVGAPPGYVGYEEGGVLTEKIRRNPYRVILFDEIEKAHHDVFNLLLQVLEEGEL
KDNLGHTVSFRNTVIIMTSNAGAREISRDARLGFNPDSGIMNLEEIRSAALAELKRLFNP
EFINRVDDIVVFHALSREQVQAILALEIQELNKRLHDQGYSIQVKQSAQDILIEKGWDPK
YGARPMRRAIQKELEDVLAVLILEQEYPAGTIFIAEDRDGKISIKSKKNKPTLLTTVPAV
SSEPISKS
NT seq 2547 nt   +upstreamnt  +downstreamnt
ttgtttaaaggtcttacccaacgggcacaacgaatacttaccgtaatagcccaggatgaa
gctcgacgttttcatagcgatcagcttcttcctgaacatatacttgttgctgtgattagg
gacggatctggtacagcctgcagagctttggaagatttagccatagatttgcaggatttc
cgtcatgttttagaacgggaaattccgcaaaagaccggtacctttattttcggggatgta
ccgccttcccgccgggctcgaaccttactcgaagctgccgctgaggaagcccgcagtttt
ggtcatgaatatgtaggtactgaacatttattgctcgcgtccataagagaggagaattct
cctgcagcacggtatttagtggaaaaacatattagcccagaaatgcttcgttccacagtg
caactcgtacttgggcagattcgggatgatggtcctgttgaagacccccgggatagcgcc
catacggccggttcaaatcctttcgggacaggaacaccaagcgggcaaaagaacacccgg
acgcccattatcgatgaattttcccgggaccttacggccatggcccggcttggttccttg
gatcccgtcattggccgtgaaaaggaggttcgccgggtagtacggattcttgcccgacga
actaagaataatccgatccttgtaggcgaacctggtgtgggcaaaaccgccgtagtcgaa
gccctggcccagcttattgcatctgaaaatgttccagaaatattagcggataaacgactc
cttgccctcgacctagcctcggtagtggccggaacaaaataccgcggcgagtttgaggaa
cggctcaaaaaaatcatgaaggaaatcagtcaggcgggaaatatcatcctctttattgat
gaaattcatacggttatcggtgccggtggtgcggaaggtactatcgatgcctctaacatg
ctcaagcccgccctttcccggggagaagttcagtgtattggcgctacaaccctcgctgaa
tatcggaagcactttgaaaaggatgcggctctcgaacggcgtttccagatggtacccgta
gaagagccaagtcttgaagaaactatacagattcttaaaggaatcaagaaacgctacgag
gaacatcaccgtgttatctataatgatggagcagttttagcggcggcaaccctggcccag
cgctatatcaccggccggttcatgcccgataaggcgattgatcttttggatgaagctggg
gcgaaacgaaaactcgaaaccgatatcaagcccgccgaattaagtgaaatagaaaacgaa
attaaacggcttacggaagaaaaggttcgccttgtggccgcccaggactatgaaaaggct
gcagaactgagggaccaagtccggtccctcaggtaccagctcgaatcggtaaaacaggcc
tgggaacgtctttcccgggaagaacggcctgcagttaccgaagctgacatacgtcaggtt
gttgcggaagccacaggaatccccctggcacggctcgaagaaagtgcatcccgtaaactg
ttacggatcgaagaagaactgcaccgttcggttataggacaggacgatgcggttcagcgg
attgctgcggccatccggcgcagcagggcaggggtatcttctctcaaacgcccccagggg
tcatttatattcttagggcccaccggggtcggtaaaacccttttggcaaaacgccttgcg
gagtatctttttggaaccgaagaagccctggttcgcatagatatgtctgactatatggaa
aaacacaatgcctcccgtcttgttggagctccccccggctatgtagggtatgaagaaggc
ggggtgcttacagaaaaaatccgtcgaaatccctatcgggttatcctttttgatgaaata
gagaaagcccaccatgatgtctttaatcttttgttacaggttttggaagagggggaactc
aaggataatctggggcatacggtaagtttccggaatacggtcatcattatgacgagcaat
gcaggggcccgtgaaatttcccgagatgctcgccttggatttaaccccgattcgggcatt
atgaacctggaagaaatccgctcagccgccctggcagaacttaagcgtctctttaaccct
gaattcattaatcgggttgatgatattgtcgtgttccatgccttgagccgcgaacaggtt
caggcaatcctggcccttgaaattcaggaattgaataaacggctccatgaccaggggtac
tcgattcaggttaaacagagtgcccaggatattttaatagaaaagggctgggatcccaaa
tatggcgcccgtcccatgcgccgggctatccaaaaagaattagaggatgtcctggccgtg
ttaattcttgaacaggaatatcccgctggaacaatatttatagccgaagaccgggatgga
aaaatcagcatcaaatcaaaaaagaataagccgaccctgctaaccacggttccggctgtt
tcctcagaaccgattagcaaatcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (35)   
   Pfam (35)   
All databases (42)   

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