KEGG   Saccharomyces cerevisiae (budding yeast): YBR263W
Entry
YBR263W           CDS       T00005                                 
Symbol
SHM1, SHMT1, TMP3
Name
(RefSeq) glycine hydroxymethyltransferase SHM1
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce00260  Glycine, serine and threonine metabolism
sce00460  Cyanoamino acid metabolism
sce00630  Glyoxylate and dicarboxylate metabolism
sce00670  One carbon pool by folate
sce00680  Methane metabolism
sce01100  Metabolic pathways
sce01110  Biosynthesis of secondary metabolites
sce01200  Carbon metabolism
sce01230  Biosynthesis of amino acids
sce01240  Biosynthesis of cofactors
Module
sce_M00141  C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:sce00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    YBR263W (SHM1)
  09102 Energy metabolism
   00680 Methane metabolism
    YBR263W (SHM1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    YBR263W (SHM1)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    YBR263W (SHM1)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    YBR263W (SHM1)
Enzymes [BR:sce01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     YBR263W (SHM1)
SSDB
Motif
Pfam: SHMT Arnt_C
Other DBs
NCBI-GeneID: 852565
NCBI-ProteinID: NP_009822
SGD: S000000467
UniProt: P37292
Position
II:736264..737736
AA seq 490 aa
MFPRASALAKCMATVHRRGLLTSGAQSLVSKPVSEGDPEMFDILQQERHRQKHSITLIPS
ENFTSKAVMDLLGSELQNKYSEGYPGERYYGGNEIIDKSESLCQARALELYGLDPAKWGV
NVQPLSGAPANLYVYSAIMNVGERLMGLDLPDGGHLSHGYQLKSGTPISFISKYFQSMPY
HVDHTTGLIDYDNLQVLAKAFRPKVIVAGTSAYSRLIDYARFKEISQGCGAYLMSDMAHI
SGLVAANVVPSPFEHSDIVTTTTHKSLRGPRGAMIFFRKGIKSVTKKGKEIPYELEKKIN
FSVFPGHQGGPHNHTIGAMAVALKQAMSPEFKEYQQKIVDNSKWFAQELTKMGYKLVSGG
TDNHLIVIDLSGTQVDGARVETILSALNIAANKNTIPGDKSALFPSGLRIGTPAMTTRGF
GREEFSQVAKYIDSAVKLAENLKTLEPTTKLDARSRLNEFKKLCNESSEVAALSGEISKW
VGQYPVPGDI
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgtttcccagagcttctgcattggccaaatgtatggcaactgttcatcgtcgtgggcta
ctcaccagtggtgcacaatcgctagtctccaaaccagtctcggagggagatccagagatg
tttgacatcttgcaacaagaacgtcacagacaaaaacactctatcacccttatcccatca
gaaaacttcacctcgaaggccgttatggatttgctaggttctgagctccaaaacaagtat
tctgaaggttatccaggtgaaagatactacggaggtaacgaaatcatcgataagtccgaa
tccttgtgtcaagcaagagctctggaactgtacggattagaccctgccaagtggggagtt
aatgttcaaccattaagcggggcacctgccaatttgtatgtttactccgctatcatgaac
gttggtgaaagattaatgggattggatttgccagatggtggtcacttgtctcacgggtac
caacttaagtcaggaacgccaatttctttcatttccaaatacttccaaagtatgccatac
catgtcgaccacactacggggctaatcgattacgataacttgcaagtattggccaaggca
ttcagaccaaaggtgatcgtggccggtacttccgcgtactcgagattaatagactacgct
agattcaaggaaatttcccaaggatgcggcgcatatttgatgagtgatatggcacacata
tccggtttggtggcagccaatgttgtcccatctccatttgaacattccgatatagttacc
acaaccactcacaagtccttgagaggcccaagaggtgctatgattttcttcagaaagggt
atcaagtctgtcaccaaaaagggcaaggaaatcccatatgagttagaaaagaaaatcaac
ttctcagttttcccaggacatcaaggtggtcctcacaaccatactatcggtgcaatggca
gtggcattaaagcaagcgatgtctccagaattcaaagaataccaacaaaaaattgtcgac
aacagcaaatggtttgctcaggaactaaccaagatgggttataagttggtttccggcggt
accgataaccacttgattgttattgacttatccggtactcaggtagacggtgctcgtgtc
gagacaattttaagtgccttgaacattgctgctaacaagaacaccatcccaggtgataag
agtgctcttttcccctctggtctaagaatcggtactccagcaatgaccacgagaggattt
ggccgtgaagagttttctcaagtcgcaaagtacattgattctgccgttaagctcgctgaa
aatttgaaaactttggaaccaacaacgaaactagatgcaagatcaagactcaatgagttc
aagaagttgtgtaatgaatctagtgaagtcgctgctttgtctggcgagatttccaagtgg
gtcggtcaataccctgtcccaggtgatatctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (10)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (44)   

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