KEGG   Saccharomyces cerevisiae (budding yeast): YDL160C
Entry
YDL160C           CDS       T00005                                 
Symbol
DHH1
Name
(RefSeq) DExD/H-box ATP-dependent RNA helicase DHH1
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    YDL160C (DHH1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sce03019]
    YDL160C (DHH1)
   03036 Chromosome and associated proteins [BR:sce03036]
    YDL160C (DHH1)
Enzymes [BR:sce01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     YDL160C (DHH1)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     YDL160C (DHH1)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     YDL160C (DHH1)
Chromosome and associated proteins [BR:sce03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    YDL160C (DHH1)
SSDB
Motif
Pfam: DEAD Helicase_C AAA_30 Arcadin_1 Phage_integrase
Other DBs
NCBI-GeneID: 851394
NCBI-ProteinID: NP_010121
SGD: S000002319
UniProt: P39517
Structure
Position
IV:complement(170410..171930)
AA seq 506 aa
MGSINNNFNTNNNSNTDLDRDWKTALNIPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMG
IFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIM
VPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLAS
RKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKH
LHKPYEINLMEELTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLA
KKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDF
PKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPATIDKSLYVA
ENDETVPVPFPIEQQSYHQQAIPQQQLPSQQQFAIPPQQHHPQFMVPPSHQQQQAYPPPQ
MPSQQGYPPQQEHFMAMPPGQSQPQY
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgggttccatcaataataacttcaacactaataataacagtaatacggatctcgatcgg
gactggaaaactgcattgaatattcccaagaaggataccagaccacagacagatgatgtc
ttaaatacaaagggtaatacttttgaagatttttatttgaaaagagagctgttaatgggt
atttttgaagccggttttgaaaaaccatcccctattcaagaagaggctattccggtagca
ataactggtagagacatattggccagagcaaagaatggtacaggtaagacagccgcattt
gttattcctacgttagagaaagtcaaaccaaagttgaataaaattcaggctttgatcatg
gttcccacaagagagttagctctgcaaacttcccaagtcgtccgtacattgggaaaacac
tgtggtatttcatgtatggtgaccactggtggtaccaatttgagagacgatattctaaga
ttaaatgaaacagtccatattttggttggtactcctggtagagtgttggatttagcttcg
agaaaagtagcagatctgtctgattgttcattattcatcatggacgaagccgataaaatg
ttatctcgtgacttcaagacaataattgaacaaatcttatccttcttacctccaactcac
caatctttattatttagcgctactttcccactaacggttaaggaattcatggttaaacat
ctgcataagccttatgaaattaatttgatggaagaattgactctaaagggtattactcaa
tactacgcctttgttgaagaaagacaaaagctacattgtttaaatactttattctctaag
cttcaaattaatcaagccattattttttgtaattctactaaccgtgtcgaattactagcc
aagaaaatcactgatttaggctattcctgttattactctcatgcaagaatgaagcaacaa
gaaagaaataaagttttccacgaatttcgtcaaggtaaggttcgtacattggtctgctcc
gatttattgacccgtggtatcgatattcaagccgttaatgtcgttatcaatttcgatttc
cccaaaacggcagaaacatatttacatcgtattggtagatccggtaggtttggccacttg
ggtttagcaatcaatttgattaactggaatgatcggtttaacctttataaaatcgaacaa
gaactgggcactgaaattgcggctattccggccactatcgataagtcattgtatgtggct
gaaaatgacgaaacggtacctgtcccattcccgatagagcaacagagctatcatcaacaa
gcgatacctcagcaacaattaccatctcagcaacaatttgctattcctccgcagcaacat
catccacaattcatggttcctccttcgcatcagcaacaacaggcgtatcctccaccgcaa
atgccatcgcagcaggggtatcctccacagcaggaacatttcatggcgatgccacctggt
cagtcacaaccccagtattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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