KEGG   Saccharomyces cerevisiae (budding yeast): YDR121W
Entry
YDR121W           CDS       T00005                                 
Symbol
DPB4
Name
(RefSeq) DNA polymerase epsilon noncatalytic subunit
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03030  DNA replication
sce03082  ATP-dependent chromatin remodeling
sce03410  Base excision repair
sce03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YDR121W (DPB4)
   03410 Base excision repair
    YDR121W (DPB4)
   03420 Nucleotide excision repair
    YDR121W (DPB4)
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    YDR121W (DPB4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sce03032]
    YDR121W (DPB4)
   03036 Chromosome and associated proteins [BR:sce03036]
    YDR121W (DPB4)
   03400 DNA repair and recombination proteins [BR:sce03400]
    YDR121W (DPB4)
Enzymes [BR:sce01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     YDR121W (DPB4)
DNA replication proteins [BR:sce03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    YDR121W (DPB4)
Chromosome and associated proteins [BR:sce03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    YDR121W (DPB4)
DNA repair and recombination proteins [BR:sce03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      YDR121W (DPB4)
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone
Other DBs
NCBI-GeneID: 851699
NCBI-ProteinID: NP_010406
SGD: S000002528
UniProt: Q04603
Structure
Position
IV:693585..694175
AA seq 196 aa
MPPKGWRKDAQGNYPTTSYIKEQENITIQDLLFPKSTIVNLAREVPQQSGKKLLINKDAS
LALQRGATVFVNHLLLFAREIAKSQDKKSCSVDDVLSALDHIGHSALKGPVRDKLDEYQA
AVEQRKKEKLDSGEVDADGDIDMGEDKENVPVEKVKEHDEIEEQGDALQDVEESSEKKQK
TESQDVETRVQNLEQT
NT seq 591 nt   +upstreamnt  +downstreamnt
atgccaccaaaaggttggagaaaagacgcccaagggaattaccccactacttcgtatatt
aaagaacaagagaacattacgattcaggacctgttatttcctaaaagcactattgtgaat
ttggcacgcgaagtgccacagcaaagcggcaaaaagctgctgataaataaagacgcatca
ctagcgttacagcgtggtgctacagtatttgttaaccacttgctcctgtttgcaagggaa
attgcaaagagtcaagataaaaaaagctgcagtgtagatgatgttctgagtgctttggac
catataggacactcggcattgaagggtccggttagagataaactagatgaataccaagct
gctgttgaacagaggaagaaggaaaaactagatagtggtgaagtagatgctgatggcgat
atagatatgggtgaagataaggagaatgtgcccgtggaaaaggttaaagagcatgacgaa
atagaagaacaaggcgatgcattacaggacgtagaagagtcctccgaaaagaaacagaaa
acggagagccaagatgtagaaactagagttcaaaaccttgagcaaacgtaa

  All links  
Gene (8)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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