KEGG   Saccharomyces cerevisiae (budding yeast): YER169W
Entry
YER169W           CDS       T00005                                 
Symbol
RPH1, KDM4
Name
(RefSeq) Rph1p
  KO
K19799  DNA damage-responsive transcriptional repressor / [histone H3]-trimethyl-L-lysine36 demethylase [EC:1.14.11.69]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sce03000]
    YER169W (RPH1)
   03036 Chromosome and associated proteins [BR:sce03036]
    YER169W (RPH1)
Enzymes [BR:sce01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     YER169W (RPH1)
Transcription factors [BR:sce03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 metabolic regulators in fungi
    YER169W (RPH1)
Chromosome and associated proteins [BR:sce03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    YER169W (RPH1)
SSDB
Motif
Pfam: JmjC JmjN zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_6 B129_C2H2-zf Zn_ribbon_ISL3 Zn_ribbon_8
Other DBs
NCBI-GeneID: 856916
NCBI-ProteinID: NP_011096
SGD: S000000971
UniProt: P39956
Structure
Position
V:523369..525759
AA seq 796 aa
MTKLIAPSEIVGGVPVFKPTYEQFEDFYAYCKAINKYGMKSGVVKVIPPKEWKDKLDLPY
SAETLQKIKIKSPIQQHISGNKGLFMVQNVEKNKTYNIIQWKDLSKDYVPPEDPKARRNS
RKGSVSKSTKLKLKNFESSFNIDDFEQFRTEYTIDLSDFQNTERLKFLEEYYWKTLNFTT
PMYGADTPGSIFPEGLNVWNVAKLPNILDHMETKVPGVNDSYLYAGLWKASFSWHLEDQD
LYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPEEAKNCPEFLRHKMFLASPKLLQEN
GIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKAGKCHCISDSV
EIDVKKLAKSWRDNNKESKGTPPLNQLPNPAMPLLHRPTLKEMESSSLRSTSPDVGHFSN
FKSKSSGVSSPLLSRMKDYSNIVEPTLEDPTLKLKRISSFQEQPLNKLLKRETSQTAMLT
DHEDNIVAMSLTSMANSAASSPRLPLSRLNSSNELSNAQPLLDMTNNTLAFPRPNGPSGL
NPLLYISNKNISGISHSAPHSPVNPNISLIKRVKSPNIVTLNISRESSRSPIALNYEARQ
QHSQQHSFSTPSTVSNLSTSVLGPLSDTNDIKTPHPERPNHKTANRILKKESPVETSKSN
LILSKVASTRQEDSFTSRNDDLDKEQGSSPLNSKFAPEEIVLSGKNKIYICKECQRKFSS
GHHLTRHKKSVHSGEKPHSCPKCGKRFKRRDHVLQHLNKKIPCISNETTVDAPIMNPTVQ
PQDGKAAINQQSTPLN
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgacgaaactaatcgctccttcagaaatcgtgggcggagtgcccgtcttcaaacccaca
tacgagcaattcgaagatttctatgcatactgcaaggccataaacaaatatggcatgaaa
agtggtgttgtgaaagtaatcccacctaaagaatggaaagacaaattagatctgccttat
tctgcggaaacgctccaaaagatcaagattaaatcacctattcagcagcatatttctggt
aataaaggtctttttatggtgcagaacgtggagaaaaacaagacctataacattatacag
tggaaagatctttctaaggactatgtgcctccggaggatcctaaagcaagacgtaattct
aggaaaggctccgtttccaaatccacgaagttgaaactgaaaaattttgaatcgtctttt
aatattgatgattttgaacagttcaggacggagtatacaatagatttatctgacttccaa
aatacggagagattaaagttcttggaagagtattattggaaaacgctaaattttactacg
cctatgtacggcgcagatacaccaggatcaatctttcctgaagggctgaacgtttggaat
gttgccaaactaccgaacatcttggaccatatggaaacaaaggttcctggggtgaatgac
tcctatctatacgctggtctatggaaggcttctttttcttggcacttggaagatcaggac
ctgtattccataaattatattcatttcggtgccccaaaacagtggtattcgataccgcaa
gaggataggttcaaattctacaaattcatgcaggagcaatttcccgaagaagccaaaaat
tgtcctgaatttttaagacataaaatgtttttggcttcgcccaaactgctgcaggaaaat
ggcatacgatgcaatgaaattgtccaccatgaaggcgaattcatgatcacttatccctat
ggttaccatgcagggttcaattatggatataacttggcagaatccgtcaactttgctttg
gaggagtggctaccgattgggaagaaagctggaaaatgccactgcatttcagactcagtg
gaaatagatgttaagaaactcgctaaatcttggagggacaataataaagagtcgaaagga
acgccacccctcaatcaattacccaatcctgccatgcccttacttcacaggccaacttta
aaagaaatggaaagcagctcgcttagatctacaagcccagatgtgggtcatttttcaaac
tttaaatccaagagctctggtgtttcttctcccttattatcacgtatgaaagattattcc
aacattgtcgagcccacactagaagatccaactttgaaattaaaaagaatctcttctttt
caagaacagcccttaaacaaacttttgaaaagagaaacttcgcaaacggcgatgctcaca
gatcacgaagacaacatagtggccatgagccttacttcaatggcaaacagtgcggcgtct
tctccgaggttgccactgtcaagattgaattcatctaatgaactctcaaatgcccaacca
ttgcttgacatgacaaacaatactcttgccttcccgcgacctaatggaccatctggattg
aaccctttattatatatctctaacaagaatattagcgggatatctcactcggctccacat
tctccagtgaatccaaatatatcgctgataaaacgagttaagtctcccaacattgtaaca
ttaaatatatccagggaatcgtcaagaagccctatagctctgaattacgaggcaagacaa
caacattcgcaacaacattcattctccacaccatcaaccgtgtcaaatctctctacttct
gtgctcgggccactgagtgacacaaacgacataaaaacaccgcaccctgaaagaccaaat
cacaagacagcaaatagaatactcaaaaaggaatctcctgtcgagacatcaaaatcaaat
cttatactttcaaaggttgcatccactcgccaagaggattcttttacaagccgaaatgac
gatctggacaaagaacaaggctcttctccattaaactctaagtttgcgcccgaagaaatc
gtgttatcaggtaagaacaagatttatatttgtaaggaatgccaaagaaagttctcttct
ggtcaccatcttacaagacacaaaaaatccgtccactctggtgagaaacctcattcttgt
cccaaatgtggcaaaagatttaaaaggagagatcacgttctgcagcacttgaataagaaa
ataccgtgtatttcaaacgaaacaacagtagatgctccaataatgaaccctacagtgcaa
ccgcaggacgggaaagcggccattaatcaacagagtacacctttaaactga

  All links  
Gene (37)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (9)   
   Pfam (9)   
All databases (52)   

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