KEGG   Saccharomyces cerevisiae (budding yeast): YGL078C
Entry
YGL078C           CDS       T00005                                 
Symbol
DBP3
Name
(RefSeq) RNA-dependent ATPase DBP3
  KO
K14811  ATP-dependent RNA helicase DBP3 [EC:5.6.2.7]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sce03009]
    YGL078C (DBP3)
Enzymes [BR:sce01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     YGL078C (DBP3)
Ribosome biogenesis [BR:sce03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    YGL078C (DBP3)
SSDB
Motif
Pfam: DEAD Helicase_C ERCC3_RAD25_C CMS1 AAA_30 Utp25_C CAMSAP_CKK AAA_22 AP3D1
Other DBs
NCBI-GeneID: 852802
NCBI-ProteinID: NP_011437
SGD: S000003046
UniProt: P20447
Position
VII:complement(360288..361859)
AA seq 523 aa
MTKEEIADKKRKVVDEEVIEKKKSKKHKKDKKDKKEKKDKKHKKHKKEKKGEKEVEVPEK
ESEKKPEPTSAVASEFYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLS
LDSSIQAEISKFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKK
RGIQVLVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKSQVVVATPG
RLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKE
VRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNE
KVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAA
RGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNG
ANQPVPEDLIKFGTHTKKKEHSAYGSFFKDVDLTKKPKKITFD
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgacaaaggaagaaatcgcagacaagaagagaaaggttgtagatgaggaggtaattgaa
aaaaagaagagtaagaaacacaaaaaggataagaaagacaagaaggaaaagaaggataaa
aagcataaaaagcataagaaggagaagaagggtgagaaggaagtggaagtaccagagaaa
gaatctgaaaagaaacctgaacctacttctgcagtggctagtgagttttatgttcagagt
gaagcactaaccagtcttccacaatctgatattgacgaatatttcaaggaaaatgaaatt
gctgttgaggattctctggatctagccctacgtccgctattatcatttgattatctttct
ttagactcttccattcaagcagaaatttccaaatttccaaaaccaacgcctattcaagcc
gtagcctggccatatttgttatctggtaaagatgttgttggtgttgctgagaccggttct
ggtaaaacatttgctttcggtgttccagctatcagccatttaatgaacgatcaaaagaaa
aggggcatacaggttctagtcatttccccaactagagaacttgcttcccaaatttatgat
aatctgattgtattaactgacaaggttggtatgcagtgttgttgtgtttatggtggtgtt
ccaaaggatgagcaaagaattcagttaaaaaagtcacaagtggtggttgctacacctggt
agattattagacctattgcaggaaggatctgttgacttatctcaagttaattacttagta
ttagacgaggcagacagaatgttggaaaaaggttttgaagaagacatcaagaatattatc
agagaaactgatgcgtccaaaagacaaactctaatgtttaccgctacctggccaaaggaa
gtccgtgaattagcttccacgttcatgaacaacccaatcaaagtatctattggtaacacg
gaccaactaactgctaacaaaagaattacacagattgttgaagtggtggacccacgtgga
aaagaaagaaagttattggaactgttgaaaaagtaccactctggtccaaaaaagaatgaa
aaggtcttgatttttgctctttataagaaggaagctgctcgtgttgaaaggaatttgaaa
tataacgggtataacgtcgcagctatccatggtgatttgtcccagcaacaaagaacgcaa
gcattgaatgagttcaaaagcgggaagtctaacttgttactggccaccgacgttgcagca
agaggtttagatataccaaatgttaagacagttattaatttaactttcccattgactgtg
gaggattatgtccatagaatcggtagaactggtagagctggtcaaacaggcacagcacac
actctgttcactgaacaagaaaagcatttggctggtggactggttaacgttttgaatggt
gccaatcaacctgttcctgaagatttgataaagttcggtactcacactaagaagaaggaa
catagcgcttatggttcattctttaaggacgtcgatttgactaagaaaccaaaaaaaatt
actttcgattag

  All links  
Gene (32)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system